Gene VEA_000481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000481 
Symbol 
ID8558787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp578501 
End bp579154 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content47% 
IMG OID646408147 
ProductGTP cyclohydrolase I type 1 
Protein accessionYP_003287634 
Protein GI262395781 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.582087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGTC TTAGCGAGTC AGCAAAGTTA GTGAAAGAAG CGCTAGAGCA ACGCGGGTTA 
GAAACACCAA TGCGCCCTAA TGCCGTTAGC CGTGAAGAGA AGAAGGAAAA GATTGAATAC 
CACATGCGTG AGATTCTTGG TCTGCTTCAG CTCGACCTTA CGGATGATAG CTTAGAGGAA 
ACGCCACACC GCATTGCAAA AATGTACGTG GACGAGATTT TCTCTGGTTT GGATTACTCC 
AACTTCCCCA AGATCACCGT TATCGAAAAC AAGATGAACG TGAGCGAAAT GGTTCGCGTG 
AAAGACATTA CTGTAACCAG TACGTGCGAA CACCATCTTG TGACAATCGA CGGAAAAGCC 
GCTGTTGCTT ATATTCCTCG CGGTAAGATC ATTGGCTTGT CTAAGATCAA CCGTATTGTT 
CGTTTCTTTG CGCAACGCCC TCAAGTTCAA GAGCGTATGA CCCAGCAAAT CCTTGTTGCT 
TTGCAAACAT TGCTTGAGTC TGACGATGTA GCGGTGACTA TCGACGCGAC GCATTACTGT 
GTGAAATCAC GCGGTGTGAT GGATGCCACC AGTGAAACCA CGACTACAGC GTTAGGTGGT 
ATTTTTAAGA GCAACCCAGC GACCCGTGCT GAATTTCTGC ATGGCCTGCG TTAA
 
Protein sequence
MSGLSESAKL VKEALEQRGL ETPMRPNAVS REEKKEKIEY HMREILGLLQ LDLTDDSLEE 
TPHRIAKMYV DEIFSGLDYS NFPKITVIEN KMNVSEMVRV KDITVTSTCE HHLVTIDGKA 
AVAYIPRGKI IGLSKINRIV RFFAQRPQVQ ERMTQQILVA LQTLLESDDV AVTIDATHYC 
VKSRGVMDAT SETTTTALGG IFKSNPATRA EFLHGLR