| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000458 |
|---|
| Symbol | |
|---|
| ID | 8558764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 539407 |
|---|
| End bp | 540399 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 646408124 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003287611 |
|---|
| Protein GI | 262395758 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAA AATACTTTTT CTGTCATATT AGATGTGATT ATTTTTCATT AATTGTGAGC
GTTATGGATA AGCTGTCATT AATAAAGTTG TTTGTATCTG TTGTGGACTT AGGGAACTTT
ACAGCAGTCG CGAATCAATT AGGGCAGTCG CCTTCTACTG TTAGTAAAGC GATTGCTCGC
CTAGAGCAGG ATTTGGGTGT TCGTTTAGTT CACCGTACAA CACGTCAACT CCAGCTCACT
GAAGCGGGGT TTAACTACCT TGAGACGGCA AGAGAAGTGA TCAACTTGCT CAAAAGTAGT
GAAGAGCAGC TTCATCAAAG TATTGCATCT CCGTTTGGTA CACTTCGTGT CAGCCTTCCT
TTATCGTTCG GGCAAAACTA TATAACTCCG CTGATTCCAG AGTTTTGCGA ACGTTACCCT
GAAGTGAAGT TGGATCTTAG CTTTTCCGAT GAATACACCA GTATATTGGA GAGTGGGATG
GACGTTGCTA TTCGAAGCGG GAGACTAAAT GACAGCAACC TGATTGCGAG GCGATTATGT
CCTATTGATA TGGGTATGTT TGCCAGTCCG GAGTACATAA AGAAGTTTGG TCGGCCTCAG
AGTGTTGAAG CGCTTAACCA GCACAAATGG ATAATGTACC GCTATAAACA ATCGGGGCGC
TTGCTTACCT TGACGATGCC TTTAGATGGG CAATTAGTAG AATTTAGTCC TACACATCAA
GTGACAGTAG ACAATGGTTA TGCGATGGCC TCTTTAGCGA GTTTAGGAGC AGGGATTGCA
CTGATGCCCC AATATCTTGC TCGAGACTTA GTACAGCAAG GTAAACTGAT GTTGGTTTCT
GAACCTCAAA GAACCGATGG TCAAGGTGTC TATATATACT ATCCAAGTCG TAAGTTTGTG
CCCGCGAAAG TAAAAGTGTT TATCGACTAT ATTATTCATA AACTTGATGA GCAGGGAGAG
GCGATCAACA GCAGTTGGAT GCTGAACCAT TAA
|
|---|
| Protein sequence | MTQKYFFCHI RCDYFSLIVS VMDKLSLIKL FVSVVDLGNF TAVANQLGQS PSTVSKAIAR
LEQDLGVRLV HRTTRQLQLT EAGFNYLETA REVINLLKSS EEQLHQSIAS PFGTLRVSLP
LSFGQNYITP LIPEFCERYP EVKLDLSFSD EYTSILESGM DVAIRSGRLN DSNLIARRLC
PIDMGMFASP EYIKKFGRPQ SVEALNQHKW IMYRYKQSGR LLTLTMPLDG QLVEFSPTHQ
VTVDNGYAMA SLASLGAGIA LMPQYLARDL VQQGKLMLVS EPQRTDGQGV YIYYPSRKFV
PAKVKVFIDY IIHKLDEQGE AINSSWMLNH
|
|---|
| |