| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000404 |
|---|
| Symbol | |
|---|
| ID | 8558710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 459231 |
|---|
| End bp | 460031 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646408070 |
|---|
| Product | putative high-affinity branched-chain amino acid transport ATP-binding protein |
|---|
| Protein accession | YP_003287557 |
|---|
| Protein GI | 262395704 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.428911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCGG AATCGCCTCT GTTGCAGGTA AACGATATTT CATTGGCTTT TGGTGGGGTG
AAAGCTTTAA CTGACGTGAG CTTCCATGTG AATGAAAAGG AAATTTTTTC AATCATTGGC
CCAAACGGTG CAGGTAAAAC CTCAATGCTC AATTGCATCT CTGGTCGATA CACACCAAAC
AAAGGCTCTG TAATCTTCGC TGGAGATGAT GTAACCAAAC GAACACCTAG CCAACGAGCT
GAGTTAGGGT TGGGAAGAAC CTTCCAGAAC TTAGCACTCT TTTCTCATAT GTCGGTACTC
GACAACATTA TGGTTGGTCG ACATCACCTA CTGAAAAACA ACTTCGTAAC AGGGCCACTT
TACTGGTTCT CTAACGCGCA GAAAGAAGAA ATGGCGCACC GTAAATACGT AGAAGACGTA
ATCGATTTTC TTGAAATTCA GCACATTCGC AAAGCCACCG CTGGCACACT TTCATACGGT
TTACGTAAAC GTGTAGAGCT TGCTCGTGCC ATTGCCTTAA AACCTAAGTT GTTGCTGCTT
GATGAACCGA TGGCAGGCAT GAACTTGGAA GAAAAGGAAG ACATGGCGCG TTACATCATG
GATCTGAATG AAGAGTTAGA CATCACCATC ATCATGATCG AGCACGATAT GGGCGTGGTG
ATGGATATCT CTAACCGCGT ATTGGTGTTG GATTTTGGTA AACACATTGC GATGGGCGAG
CCAGAAGAAG TGATGGCCAA CCCGCATGTG AAACAAGCGT ACTTAGGCGA AGAGCTACCG
ACATTAGAGG AGAGTGCATA A
|
|---|
| Protein sequence | MVSESPLLQV NDISLAFGGV KALTDVSFHV NEKEIFSIIG PNGAGKTSML NCISGRYTPN
KGSVIFAGDD VTKRTPSQRA ELGLGRTFQN LALFSHMSVL DNIMVGRHHL LKNNFVTGPL
YWFSNAQKEE MAHRKYVEDV IDFLEIQHIR KATAGTLSYG LRKRVELARA IALKPKLLLL
DEPMAGMNLE EKEDMARYIM DLNEELDITI IMIEHDMGVV MDISNRVLVL DFGKHIAMGE
PEEVMANPHV KQAYLGEELP TLEESA
|
|---|
| |