| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000364 |
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| Symbol | |
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| ID | 8558670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 411849 |
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| End bp | 413564 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408030 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_003287517 |
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| Protein GI | 262395664 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAC ACTACGATTA TATCATCGTC GGTGCGGGTT CGGCCGGCTG TGTGTTAGCG
GATCGCTTAA GTGAAAGTGG TCAATATTCG GTCCTATTAC TCGAAGCGGG TGGGTCGGAT
AAAAGTATTT TTATCCAAAT GCCAACGGCG CTTTCTTACC CTATGAACAC TGAAAAATAC
GCGTGGCAGT TTGAGACAGT TGAAGAGCAA GGGTTGGATG GCCGTCAACT TCATTGTCCT
CGCGGGAAAG TTCTGGGCGG TAGTTCGTCG ATCAACGGCA TGGTTTACGT TCGTGGACAC
GCTTGTGACT TTGACCAGTG GGAAGAGGAA GGCGCGAAAG GCTGGAATTA TCAATCGTGT
TTGCCTTATT TCCGTAAGGC AGAGTCTTGG ATTGGTGGTG CTGATGAATA CCGAGGCGAT
AACGGTCCAG TCGGCACATG TAACGGCAAC GATATGAAGC TCAATCCGCT GTATCAAGCT
TTTATTGATG CAGGCAAAGA AGCGGGCTAC CCAGAAACAA AAGATTACAA CGGTTATCAG
CAAGAAGGCT TTGGCCCAAT GCACATGACC GTTGACAAAG GCGTACGCGC TTCAACCTCT
AACGCATACT TAAGCCGTGC CAAAAAACGC AAAAACTTCA CCCTAATGAA GCGAGTGACG
GTTCATCGAG TTTTATTAGA AGAAACTGAT GCAGAAGGCA AGAAAGCGGT AGGCGTTGAA
TTTGAAAAAT CAGGTTCAAT TCAGCAATGT TTTGCGAATA ATGAAGTGAT TTCGAGTGCG
GGTTCGGTTG GCTCAGTTCA GCTGATGCAG CTTTCAGGCA TTGGCCCTAA GGCAGTATTA
GAAAAAGCGG GCATTGAGGT GAAACACCCG TTGGAGGGGG TAGGTAAAAA TCTGCAAGAT
CACTTAGAAG TGTACTTCCA ATATCACTGT AAACAACCTA TTACGCTCAA CAGCAAATTA
GGTTTGGTGA GCAAGGGCTT GATTGGCACC GAATGGATAT TAACTCGCAA AGGCCTTGGG
GCTACTAACC ACTTTGAATC ATGTGCGTTT ATCCGTTCTC GTGAGGGACT AAAGTGGCCA
AATATTCAAT ATCACTTTTT GCCAGCGGCA ATGCGTTATG ACGGACAAGC TGCTTTTGAC
GGTCATGGTT TCCAAGTGCA CGTTGGACCT AACAAGCCCG AAAGTCGTGG CTCGGTCGAA
GTTGTCTCTG CGAATCCGAA TGATAAGCCG AAGATTGAGT TTAACTACAT TTCCACTGAA
CAAGATAAGC AGGATTGGCG TGATTGTATT CGCCTTACTC GCGAGATCCT CAATCAGCCA
GCCATGGATG AGTTTCGTGG TGATGAGATC CAGCCGGGTC TGAATATCAC AACGGATGAA
CAAATTGATG AATGGGTGAA GCAGAATGTC GAGAGTGCTT ACCATCCATC TTGTACCTGC
AAAATGGGCG CAGACAATGA CCCATTAGCG GTTTTGAATG AGCGGTGCCA AGTACGCGGT
ATTCAAGGCT TGCGTGTGGT GGACTCTTCT ATTTTCCCAA CCATTCCGAA CGGTAATTTA
AATGCGCCAA CGATTATGGT GGCAGAACGT GCCGCGGACA TGATTTTGGA TAACGCCCTG
GAAACGTCGA ACAACGCACC AGTTTGGATT GCACCGAACT GGCAAGAGAT GCAACGAATG
CATCCGCCAA AAAGAGATCT CGATTCGATC TCATAA
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| Protein sequence | MQQHYDYIIV GAGSAGCVLA DRLSESGQYS VLLLEAGGSD KSIFIQMPTA LSYPMNTEKY
AWQFETVEEQ GLDGRQLHCP RGKVLGGSSS INGMVYVRGH ACDFDQWEEE GAKGWNYQSC
LPYFRKAESW IGGADEYRGD NGPVGTCNGN DMKLNPLYQA FIDAGKEAGY PETKDYNGYQ
QEGFGPMHMT VDKGVRASTS NAYLSRAKKR KNFTLMKRVT VHRVLLEETD AEGKKAVGVE
FEKSGSIQQC FANNEVISSA GSVGSVQLMQ LSGIGPKAVL EKAGIEVKHP LEGVGKNLQD
HLEVYFQYHC KQPITLNSKL GLVSKGLIGT EWILTRKGLG ATNHFESCAF IRSREGLKWP
NIQYHFLPAA MRYDGQAAFD GHGFQVHVGP NKPESRGSVE VVSANPNDKP KIEFNYISTE
QDKQDWRDCI RLTREILNQP AMDEFRGDEI QPGLNITTDE QIDEWVKQNV ESAYHPSCTC
KMGADNDPLA VLNERCQVRG IQGLRVVDSS IFPTIPNGNL NAPTIMVAER AADMILDNAL
ETSNNAPVWI APNWQEMQRM HPPKRDLDSI S
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