Gene VEA_000299 details

Gene Information

• Locus tag: VEA_000299
• ID: 8558604
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: +
• Start bp: 323563
• End bp: 324210
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 646407964
• Product: accessory colonization factor AcfA
• Protein accession: YP_003287452
• Protein GI: 262395599

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0418027
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAAA CACTTCTTGC GTTACTTGTT ACCTGCTCAG TTTCGGTATC TGCGGCTCCT 
TATGTAGGTC TGGAATATGG ACTAGGCACC ACTGACCATG ATTTGGAGCC TCACTTTTCA 
ACTGACAACG TAACACTCAA CCCTGAGATT GAAGACGGTA TTTTCTCAGG TTTTGTCGGT 
TACGCGTTCA ATGACAACTG GGCGCTAGAG TTGGGCTACA GCCAATTTGA CCTTGATGAT 
AATCGTTCAA AGAACCTTGG CATCAAACAA ATTGATGGCA AAGATTACCA TCATGAAATG 
GATTGGGATG CGTCAATCAA AGCCAAGCAA GTGTCGCTGT CTCCAGTGTT TAGTTATGCA 
TTAAATAACA AATGGACAAC AAAATTCAAA GCGGGTCTAA CGTACACGGA ATACAACGCC 
AAGGTTTCTA AACATCAAGA ATATGAGCTT GTCGCGAATG ATGATGTAGA AATGAACAAC 
ACGCTTTTCC ACAACACAGA GAAAAACAAC GAGCTAGGCG CAATGTTCTC ATTGGGTGCG 
GAATACAGAA TTTTCCCGCA GCTCACCATT GGTGCAAACG CAAAATATCA ACTAGACAGC 
TACGCAAACA CAGCATCCTT TAACGTAGGC ACAACTTACT ACTTCTAA 

 

Protein sequence

MNKTLLALLV TCSVSVSAAP YVGLEYGLGT TDHDLEPHFS TDNVTLNPEI EDGIFSGFVG 
YAFNDNWALE LGYSQFDLDD NRSKNLGIKQ IDGKDYHHEM DWDASIKAKQ VSLSPVFSYA 
LNNKWTTKFK AGLTYTEYNA KVSKHQEYEL VANDDVEMNN TLFHNTEKNN ELGAMFSLGA 
EYRIFPQLTI GANAKYQLDS YANTASFNVG TTYYF