| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000234 |
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| Symbol | |
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| ID | 8558539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 255400 |
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| End bp | 258264 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646407899 |
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| Product | glycine dehydrogenase (decarboxylating) |
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| Protein accession | YP_003287387 |
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| Protein GI | 262395534 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.652366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAT TACTTCAAAG CCTCAGCACA CAAAATGAGT TCGTTGGACG CCACAACGGA
CCAAGCAAAT CAGACCAACA AAAAATGTTG GATGCCATCA ACGCGGTAAG CCTTGACGCC
CTCATCGAAG AAACCGTGCC TGCACAAATT CGCCTAGAAC AACCAATGAC GTTGGCAGAA
GCGAAAAGCG AAGCAGACAT GCTAGTGACG ATGAAGCAGT TTGCTAAACA AAACCAAATT
AAACGTACAT TCATTGGCCA GGGCTACTAC AACACGTTTA CTCCAAACGT CATTCTACGT
AACGTGCTAG AAAACCCTGG CTGGTATACC GCTTACACAC CTTACCAACC TGAAATCTCT
CAAGGTCGCT TGGAAGCACT TTTGAACTTC CAACAAATGA TCATCGACCT AACTGGTATG
GAAATCGCGA ACGCCTCATT GCTAGACGAA GCAACAGCGG CAGCAGAAGC AATGACTCTG
TGTAAGCGCG CAGGTAAGAG CAAGAGCAAC GTATTCTTTG TGGCTGACGA TGTTCACCCA
CAAACGCTAG AAGTAGTAAA AACTCGTGCA AAATTCATCG GTTTTGAAGT TCTGGTTGGT
TCGCTAGAAT CCCTACCAGA GCAAGACGTG TTCGGTGCAT TAGTTCAATA CCCAAGCACA
ACAGGTGAAG TTCGTGACCT AACGGACATC ATCGCAAAAG CGCAAGCAAA CAAAACGCTT
GTCACTGTTG CGACTGACCT GCTTGCTTCT ACCCTATTGA AACCTGCTGG TGAAATGGGC
GCAGACGTAG CAATTGGCTC TGCACAACGT TTCGGCGTTC CTATGGGTTA CGGCGGTCCA
CACGCGGCAT TCATGGCAAC GCGTGACAAA CACAAGCGTA CCATGCCAGG TCGTGTTATA
GGTGTTTCTA TCGATACCAA CGGTAACCAA GCACTGCGCA TGGCAATGCA AACTCGTGAG
CAGCATATCC GCCGCGAAAA AGCGACATCG AACATCTGTA CCGCTCAAGC ATTGCTAGCG
AACATGGCGT CTTTCTACGC GGTTTACCAC GGCGCAGAAG GTCTACGCAC TATTGCTCGC
CGTACACACC ATATGACTGC GATTATCGCC GCTGGCCTAA CCAAAGGCGG CTTTGAACTT
GCTCATAACA GCTTCTTCGA TACCATCACG ATCAACACAG GTTCAAAAAC AGAAGAGCTT
TACGCAAAAG CACTTTCAGC AGACATCAAC CTACGTCTAC TACCTGGCAA GCTAGGTATT
AGCTGTGACG AAACAACCAC GGTCGCTGAT GTAGAAGCAC TATTTGCAGT CTTTGGTGTA
AAAGAAGACG TAGCAGCACT ATCGACGGAA ATCGGAGGCA ACGAGTTTGC GGCAATTCCA
GAAGCGCTAC GCCGCACAAC AGAATACCTG ACTCACCCTG TATTCAATAC GCACCATAGC
GAAACGCAAA TGATGCGTTA CCTGAAACAG CTAGAGAACA AAGACTTCTC GCTAACGCAC
GGCATGATCC CACTAGGCAG CTGTACGATG AAGCTGAACG CAGCAGCAGA GATGATCCCA
ATCACTTGGC CTGAGTTTGG TTCTATCCAC CCATTCGCGC CAGCAGAACA AGCGGCGGGC
TATGCAGCAC TAGCGAAAGA TCTAAAAGAG AAGCTTTGTG AGATCACAGG CTACGACGCA
TTCTCACTTC AGCCAAACTC TGGTGCATCT GGTGAGTATG CAGGTCTTAT CGCGATTCAA
CGCTACCACG AAAGCCGTGG CGAAGGTCAC CGCAATGTAT GTTTGATCCC GAGCTCTGCG
CACGGTACTA ACCCTGCGAC AGCATCTATG GTGTCAATGA AAGTTGTCGT GGTTAAGTGT
GATGAAGAAG GCAACATCGA CATCGACGAC CTAGCAGCGA AAATCGAGAA ACACAAAGAC
AATCTATCAA GCATTATGAT CACTTACCCT TCTACGCACG GCGTTTACGA AGAGAAAGTG
AAAGAAGTGT GTGAAATGGT TCATGCCGCT GGCGGTCAGG TTTACCTAGA CGGCGCTAAC
ATGAACGCGC AGGTTGGTCT AACATCACCA GGCTTCATCG GTTCAGACGT TTCTCACCTA
AACCTACACA AAACCTTCTG CATCCCGCAC GGTGGTGGCG GTCCGGGTAT GGGTCCTATC
GGTGTGAAAT CTCACCTAGC GCCTTTCCTA CCAGGCCATA TTGAAGACGG CGTAGAAGGC
GAAGATTTTG CAGTATCAGC AGCAGATATG GGTAGCGCTT CTATCCTACC GATCTCTTGG
GCTTACATCG CAATGATGGG CGAAGCAGGC CTAACAGATG CAACAAAAGT AGCAATTCTG
AACGCAAACT ACGTGATGGA AACACTTCGC CAACACTACC CTGTTCTTTA TCGTGGCAAA
AATGGTCGTG TAGCGCACGA ATGTATTATC GACATTCGTC CACTGAAAGA AGAAACAGGC
ATCAGCGAAG AAGACATTGC GAAGCGTCTA ATGGACTACG GTTTCCACGC ACCAACTATG
TCGTTCCCTG TAGCGGGCAC GCTAATGGTT GAGCCAACGG AATCGGAAGA TCTAGAAGAG
CTAGACCGCT TCTGTGATGC GATGATCGCT ATCCGCGAAG AAATGGAAAA AGTGAAAAAC
GGTGAATGGC CACTAGAGAA CAACCCTCTC GTTAATGCGC CACACACGCA AGTTGACCTT
TCTGCTGAAG AGTGGGACCG TCCTTACTCT CGCGAGCTTG GCTGCTTCCC TTCTAAAGCG
ACCAAGTCTT GGAAGTACTG GCCAACAGTA AACCGCGTAG ATAACGTATA CGGCGACCGT
AACCTAATCT GTTCATGCCC AAGCATCGAT AACTACGAAG ATTAA
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| Protein sequence | MTELLQSLST QNEFVGRHNG PSKSDQQKML DAINAVSLDA LIEETVPAQI RLEQPMTLAE
AKSEADMLVT MKQFAKQNQI KRTFIGQGYY NTFTPNVILR NVLENPGWYT AYTPYQPEIS
QGRLEALLNF QQMIIDLTGM EIANASLLDE ATAAAEAMTL CKRAGKSKSN VFFVADDVHP
QTLEVVKTRA KFIGFEVLVG SLESLPEQDV FGALVQYPST TGEVRDLTDI IAKAQANKTL
VTVATDLLAS TLLKPAGEMG ADVAIGSAQR FGVPMGYGGP HAAFMATRDK HKRTMPGRVI
GVSIDTNGNQ ALRMAMQTRE QHIRREKATS NICTAQALLA NMASFYAVYH GAEGLRTIAR
RTHHMTAIIA AGLTKGGFEL AHNSFFDTIT INTGSKTEEL YAKALSADIN LRLLPGKLGI
SCDETTTVAD VEALFAVFGV KEDVAALSTE IGGNEFAAIP EALRRTTEYL THPVFNTHHS
ETQMMRYLKQ LENKDFSLTH GMIPLGSCTM KLNAAAEMIP ITWPEFGSIH PFAPAEQAAG
YAALAKDLKE KLCEITGYDA FSLQPNSGAS GEYAGLIAIQ RYHESRGEGH RNVCLIPSSA
HGTNPATASM VSMKVVVVKC DEEGNIDIDD LAAKIEKHKD NLSSIMITYP STHGVYEEKV
KEVCEMVHAA GGQVYLDGAN MNAQVGLTSP GFIGSDVSHL NLHKTFCIPH GGGGPGMGPI
GVKSHLAPFL PGHIEDGVEG EDFAVSAADM GSASILPISW AYIAMMGEAG LTDATKVAIL
NANYVMETLR QHYPVLYRGK NGRVAHECII DIRPLKEETG ISEEDIAKRL MDYGFHAPTM
SFPVAGTLMV EPTESEDLEE LDRFCDAMIA IREEMEKVKN GEWPLENNPL VNAPHTQVDL
SAEEWDRPYS RELGCFPSKA TKSWKYWPTV NRVDNVYGDR NLICSCPSID NYED
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