| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000193 |
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| Symbol | |
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| ID | 8558498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 209222 |
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| End bp | 210673 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407858 |
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| Product | formate efflux transporter |
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| Protein accession | YP_003287346 |
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| Protein GI | 262395493 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2116] Formate/nitrite family of transporters |
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| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000746052 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGTGA CCAGCTCTCA AAATCACCAG TACTTTTCTC CAAAAGAAAT GATGGCTGAA
GCGGAAAAAT TTGCGTTAAG TAAAGCAAAC AAAACCAGCA GTATGACACT GAGTCTTGCC
ATCATGGCGG GCGCGTTCAT TGGATTGGCG TTCTTGTTTT ACATCACGGT GACTACTGGC
AGCGCTGGCG CTGGTTGGGG CTTAAGCCGT CTTGCTGGCG GATTAGCATT TAGTATGGGC
TTGATCCTCA TCGTGATCTG CGGCGGTGAA CTATTTACCA GCTCAGTTCT TTCCAGTATC
TCATGGGCCA ATAAGCAAAT CTCGTTCGGA AAAATGCTTT CTATTTGGGG CAAGGTTTAC
GTTGGCAACT TCATTGGTGC GATGTTCCTA CTTGCGCTAG TTACTGCAGC TGGTCTTTAT
CAAATGGATA GCGGTCAATG GGGGTTAAAT GCGCTTAACA TCGCGCAGCA CAAGCTTCAT
CACACTCTCA TTCAGGCGTT TGCGCTCGGC ATCCTTTGTA ACCTATTGGT CTGCCTCGCG
ATTTGGTTAA CGTTTAGCTC TGCAAATGCA ATGACAAAAG CAGCAATGAC AATCATGCCT
GTGGCCATGT TTGTCAGCAG TGGCTTTGAA CACTGTGTCG CGAACATGTT TATGGTTCCA
CTTGGCATTG TTATCGCGAA TTTTGCGCCT GAGTCTTTTT GGGCCTCCGT CGGTGTGCCC
GCTTCACAGT ACGCAGACTT AAATATTGGC CACTTTATTA CCGCTAACTT AATTCCTGTC
ACGCTTGGCA ACATCGTCGG CGGAGCGGTT TTAGTTGGTC TTGCAAACTG GTGTATTTTT
CGCCGACCAG AACTAAAAGC AGCGAATATA TCTTCTATCA CAACGACTAC AACACTCTCG
TCAGTTAAGG ATTTCACCAT GAAAAACGCA TCTTTTGTTA AAGACATTAT GAACCCAAAA
CCAGTTACCA TCAGTGCAGA AACACCGATA GCAATCGCAC TAGATGTGCT ACTTGATAAC
AACGTAACTA GCGCACCTGT TGTAGACGTA CAAAATCGAT TGGTTGGCTT CTTCTCTGCT
CACGATGTGA TGGTAGAACT ATGGTGTGAG GACTACATTC CGGTGAAAGA CCAAAAAGTC
GTCGACATCA TGAGCCGCGA TGTGGTCGCA ATTGATGCTG GTGATCGTCT CGTTGATGTT
GTCGAATTCC TATGTATCGA TAAAGAGCAG TTGTACCCAA CGAGCAGCAT GGGCATCGCC
ACTCGCATGA CGTCTCTATC TTTAGAAGAA CGCGCAAAAA GCATCAAAGT GAGCAAGCCA
CAAGTACTTC CTGTACTTGA AAATGGCCAG ATGGTCGGTG TTGTTACTCG TACTGAAGTA
TTAAAAGCAC TACGCCCGAT TTTTGGTGAG CGTTTAAACC TAGTAGAAAA AAACGAGTTA
GAAACAGCGT AA
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| Protein sequence | MAVTSSQNHQ YFSPKEMMAE AEKFALSKAN KTSSMTLSLA IMAGAFIGLA FLFYITVTTG
SAGAGWGLSR LAGGLAFSMG LILIVICGGE LFTSSVLSSI SWANKQISFG KMLSIWGKVY
VGNFIGAMFL LALVTAAGLY QMDSGQWGLN ALNIAQHKLH HTLIQAFALG ILCNLLVCLA
IWLTFSSANA MTKAAMTIMP VAMFVSSGFE HCVANMFMVP LGIVIANFAP ESFWASVGVP
ASQYADLNIG HFITANLIPV TLGNIVGGAV LVGLANWCIF RRPELKAANI SSITTTTTLS
SVKDFTMKNA SFVKDIMNPK PVTISAETPI AIALDVLLDN NVTSAPVVDV QNRLVGFFSA
HDVMVELWCE DYIPVKDQKV VDIMSRDVVA IDAGDRLVDV VEFLCIDKEQ LYPTSSMGIA
TRMTSLSLEE RAKSIKVSKP QVLPVLENGQ MVGVVTRTEV LKALRPIFGE RLNLVEKNEL
ETA
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