Gene VC0395_A2830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2830 
Symbol 
ID5135472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp2979155 
End bp2979733 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content49% 
IMG OID640534274 
Producthypothetical protein 
Protein accessionYP_001218680 
Protein GI147675185 
COG category 
COG ID 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.496531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGTG GTTTCACCCT AATCGAAATG GTGATCACTA TTATCTTGCT TGGCATTGTT 
GGCTTATTTC TGGGCAATAT TGCTGGGCAA GCGATGGGGA TTTACGTCGA TACCACTGCG 
CGTGAAGCCT TAATCCAGCA AGGGCGTTTT TTAACGGAAC GTATGAGCCG TGAACTGCGT 
GAAGCTGTAC CCAATAGCGT AATCGTGGCC AATGGTTGTA TTGAGTTTCT GCCGATTGTA 
AACAGCGCGA TTTATCAGTC ATTACCGACG AATACCGTGA ATACTCTGCG CCTCTTGCCC 
ATCACTAAGT CGATCCAAGC GGGAGAGCGT TTAGTGATTT CTCCCAATGA TCCTGCTGCG 
TTACGCGCCG CTCTCTTACC AGCAGCGGGG CAAATTGCCG AAGTCGCCAG TACTGTTGAT 
TTCACCCCAC CACAGGATCG CACTATGGTG AATGTCCCCT TAGTCAGGGC ACTTTGTTTA 
CCCTACAGTC GCCCGCGAAT CGCGCCTATT TTTATACTAC CCCCGTGGCA TATTGTTACC 
AAGGTAACAG CATCTACCGC TATGCAGGCT ATAGTTTGA
 
Protein sequence
MSRGFTLIEM VITIILLGIV GLFLGNIAGQ AMGIYVDTTA REALIQQGRF LTERMSRELR 
EAVPNSVIVA NGCIEFLPIV NSAIYQSLPT NTVNTLRLLP ITKSIQAGER LVISPNDPAA 
LRAALLPAAG QIAEVASTVD FTPPQDRTMV NVPLVRALCL PYSRPRIAPI FILPPWHIVT 
KVTASTAMQA IV