| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2790 |
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| Symbol | |
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| ID | 5137856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2936415 |
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| End bp | 2937398 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640534235 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_001218647 |
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| Protein GI | 147675235 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCACT CATGCAGACT CTCAGTTGCT CCAATGCTCG ATTGGACCGA CCGCCACTGC
CGTTATTTCC ACCGTCTGCT CTCTGCGCAG ACTCTGCTGT ACACCGAAAT GGTGACGACT
GGCGCGATCA TCCATGGTCG TGGCGATTTT CTGGCGTATA ACCAAGAAGA GCATCCTGTA
GCGTTACAGT TTGGTGGTTC CAATCCTAAG GATTTAGCGC ATTGTGCCAA GCTGGCTCAA
GAGCGAGGCT ATGATGAAAT TAACCTCAAC GTCGGCTGTC CATCCGATCG GGTGCAGAAT
GGCCGCTTTG GCGCTTGTCT GATGGGCGAG CCGGACTTGG TGGCGGAGTG CGTCGCCGCC
ATGCGTGCGG TTGTCGACAT TCCGGTGACA GTCAAAACGC GTATCGGTAT TGATGATCAA
GACTCGTACG AGTTTTTAAC TCAGTTTATC GCCACAGTTG CGGAAAAAGG TGGCTGTGAG
CAATTTACTA TCCATGCGCG TAAAGCTTGG TTAAGTGGTC TGAGCCCGAA AGAAAACCGT
GAAATTCCAC CACTGGATTA CCCACGAGCG TACCAGATCA AACGTGATTT TCCGCACTTA
ACCATTGCAG TTAACGGTGG GGTGAAGAGC TTGGAAGAAG CGAAACTGCA TCTGCAACAT
CTTGATGGTG TGATGATCGG TCGAGAAGCG TATCAAAATC CGTATTTACT GGCTGAAGTG
GATCAGCAGA TTTTTGGCTT AGAAACGCCT GTGAAAAAAC GCTCACAAGT CATCCATGAA
ATGATGCCTT ATATTGAGCG TGAACTTTCA CAAGGCACCC ATCTTGGTCA TATGACTCGC
CATATGTTAG GACTGTTCCA AAATATGCCG GGTGCACGCC AATGGCGACG CCATATCAGT
GAGAATGCGC ACAAGCCTGG AGCGGGATTG GAAGTGGTTG AACAGGCGTT GGCCAAGATC
CCTTACCAAG AGTTAGGTGT GTAA
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| Protein sequence | MTHSCRLSVA PMLDWTDRHC RYFHRLLSAQ TLLYTEMVTT GAIIHGRGDF LAYNQEEHPV
ALQFGGSNPK DLAHCAKLAQ ERGYDEINLN VGCPSDRVQN GRFGACLMGE PDLVAECVAA
MRAVVDIPVT VKTRIGIDDQ DSYEFLTQFI ATVAEKGGCE QFTIHARKAW LSGLSPKENR
EIPPLDYPRA YQIKRDFPHL TIAVNGGVKS LEEAKLHLQH LDGVMIGREA YQNPYLLAEV
DQQIFGLETP VKKRSQVIHE MMPYIERELS QGTHLGHMTR HMLGLFQNMP GARQWRRHIS
ENAHKPGAGL EVVEQALAKI PYQELGV
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