| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2771 |
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| Symbol | rpsL |
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| ID | 5136126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2920591 |
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| End bp | 2920965 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640534217 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001218629 |
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| Protein GI | 147674738 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000000785263 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACTA TTAACCAGTT GGTTCGTAAG CCACGTGCTA AGCAAGTTGT TAAAAGCAAC
GTGCCAGCAC TAGCTGCGTG CCCACAAAAA CGTGGTGTAT GTACTCGTGT TTACACTACT
ACACCTAGAA AACCTAACTC AGCACTTCGT AAAGTATGTC GTGTACGCCT AACTAACGGT
TTTGAAGTTA CTTCATACAT CGGTGGTGAA GGTCACAACC TACAAGAGCA CAGTGTTGTT
CTGATCCGTG GTGGTCGTGT TAAAGACCTC CCAGGTGTTC GCTACCACAC AGTTCGTGGT
GCACTTGACT GTGCAGGCGT GAATGACCGT AAACAAGCTC GTTCTAAGTA CGGTGTGAAG
CGTCCTAAGT CTTAA
|
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| Protein sequence | MATINQLVRK PRAKQVVKSN VPALAACPQK RGVCTRVYTT TPRKPNSALR KVCRVRLTNG
FEVTSYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHTVRG ALDCAGVNDR KQARSKYGVK
RPKS
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