| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2757 |
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| Symbol | miaA |
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| ID | 5136656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2911116 |
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| End bp | 2912063 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640534203 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001218615 |
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| Protein GI | 147673758 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.144473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAA AGTTACCTCT CGCCCTCTTC TTAATGGGCC CAACGGCCTC TGGCAAAACG
GATTTAGCCA TTCGCTTACG TCAGAAATAT CCGGTGGAGA TCATCAGCGT CGACTCGGCA
CTGATTTATC GAGGGATGGA CATAGGCACC GCAAAACCGG ATGCTCAAGA GCTAGCACTC
GCACCGCACC GTTTGATCGA TATTCTCGAT CCGAGTGAAG CGTATTCGGC TGCCGATTTT
CGTCGTGATG CATTAAAAGA GATGGCGGAT ATCGTCGCTC AGGGCAAAAT CCCACTGTTG
GTGGGAGGCA CAATGCTCTA CTTTAAAGCC TTACTCGAAG GGTTATCACC ACTACCTGCC
GCGGATCCCG TGATTCGCCA GCAGATCGAA CTGGAAGCTG AAAAGCTTGG CTGGCAGGCG
TTACACGATC AGTTACAACA GATTGATCCC GTCTCAGCAC AGCGAATTCA TCCCAATGAT
CCACAAAGAT TGTCGCGGGC ATTGGAAGTT TATCGAATTT CAGGTAAAAC TCTTACTGAA
CTGACACAAA CCAAAGGGGA AGCAATTCCT TATCGGGTGC TGCAGTTTGC AATTGCTCCC
AAGGAAAGGG CAGAACTCCA TCGTCGGATT GAACTTCGCT TTGAGAAGAT GGTCGAATCA
GGGTTTGAAG AAGAGGTCAA AGCATTATAT GCCAGAGACG ATCTTCATCC GGATCTTCCT
TCGATTCGCT GCGTCGGTTA CCGACAGATG TGGGATTACT TAGACGGTCA TGGAACCTTA
GATGAAGCGA TTTATCGCGG CATCTGTGCC ACCCGTCAAT TGGCCAAGCG ACAGATCACC
TGGTTACGCA GCTGGGATGA TTTAACTTGG TTAGATAGCG AAAACGTTGA TCAAGCCGTT
GAAACGCTCT CGAATGCGAT AGCTTCCAAC GAAATAAGCT GTGTATAA
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| Protein sequence | MTQKLPLALF LMGPTASGKT DLAIRLRQKY PVEIISVDSA LIYRGMDIGT AKPDAQELAL
APHRLIDILD PSEAYSAADF RRDALKEMAD IVAQGKIPLL VGGTMLYFKA LLEGLSPLPA
ADPVIRQQIE LEAEKLGWQA LHDQLQQIDP VSAQRIHPND PQRLSRALEV YRISGKTLTE
LTQTKGEAIP YRVLQFAIAP KERAELHRRI ELRFEKMVES GFEEEVKALY ARDDLHPDLP
SIRCVGYRQM WDYLDGHGTL DEAIYRGICA TRQLAKRQIT WLRSWDDLTW LDSENVDQAV
ETLSNAIASN EISCV
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