| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2702 |
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| Symbol | |
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| ID | 5135947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2862811 |
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| End bp | 2864652 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640534150 |
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| Product | hypothetical protein |
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| Protein accession | YP_001218580 |
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| Protein GI | 147675017 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000193644 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTA AGGACTTACG GGATTTTCTT GACTATTTAG AGCAACGTGG TGAGCTAAAA
CGTATTACCC ATCCGATTGA TCCGCATTAT GAAATGACCG AGATCAGCGA CCGGACGTTA
CGTGCTAAAG GCCCAGCGTT GTTGTTTGAA AATCCGCTAG GTTACGACTT TCCAGTGCTA
ACCAATTTGT TTGGTACGCC AGAACGCGTT GCTATGGGCA TGGGGCGACA GCAGGTTCAA
GAGCTGCGTG ATGTCGGTCA GTGGTTGGCT TATCTTAAAG AGCCAGAACC GCCTCGTGGT
TTAAAAGAGC TGATTGAAAA GCTGCCCGTT TTTAAACAAG TGCTCAATAT GCCAGTTAAG
CGCTTGCGTC GTGCTCCTTG CCAAGAAATC GTGTGGCAGG GTGATGCGGT TGATCTCGAT
AAAATCCCTG TGATGAGCTG CTGGCCGGAC GATGTTGCAC CACTTTTAAC TTGGGGTTTA
ACCATTACGC GTGGCCCACA TAAAAAGCGC CAAAACCTTG GGATCTATCG TCAGCAAAAA
ATCGCCCGTA ATAAAGTCAT CATGCGTTGG TTAGCCCATC GCGGAGGGGC ATTAGACTTG
CGGGATTGGA TGGAAAAACA TCCCGGAGAG CCTTTTCCTG TCAGCGTGGC GTTTGGTGCC
GATCCGGCGA CCATTCTCGG TGCAGTAACA CCCGTCCCAG ATACCTTATC TGAATACGCG
TTTGCTGGAC TGTTGCGTGG CAGTCGTACT GAAGTGGTCA AGTCGATCAG TAACGATCTG
GAAGTGCCCG CAAGTGCTGA AATCGTGCTC GAAGGCTATA TCGATCCTAA CGAATTTGCA
GATGAAGGTC CTTATGGTGA CCACACGGGT TATTACAACG AGGTTGAGCG CCATCATGTG
TTCACTGTCA CTCATGTGAC CATGCGTAAT AAGCCGATTT ATCACAGCAC CTATACAGGG
CGTCCGCCCG ATGAACCCGC CGTGCTTGGT GTGGCGCTTA ACGAAGTCTT CGTACCTATC
TTGCAAAAGC AGTTTCCTGA AATTGCCGAT TTTTATCTGC CGCCAGAAGG CTGCTCGTAT
CGCATGGCGA TAGTGACACT TAAGAAACAG TATCCGGGAC ACGCTAAGCG GGTGATGCTG
GGTGTGTGGT CATTCCTACG TCAATTTATG TACACCAAGT TTGTGATTGT GTGTGATGAA
CAAGTGAATG CGCGCGATTG GCCACAAGTG ATTGCCGCTA TGGTCAATCA CATGTCGCCT
CTGCGCGATA CTCTATTTAT TGAGCATACG CCGATTGACT CGCTGGATTT TGCTTCACCA
GTGGTGGGTT TAGGCTCAAA AATCGGTTTG GATGCCACCG CCAAATGGCC TGCAGAGCTG
GCGGTTTCTA ATTCTGACCA GAGTGACAAG ACAACGGAAC TTTCACTGGA AGCGCTAAAA
GCCTGCTTGA GTGATGAAGC GGATGTGTTG GATGTTGCAT TACCGGAGGC GGCGAATGAT
AAGTTGGTTC TTCTACTTAT TAATAAGCAG GAAGCAGGGC AGGCACAGCA ACTGTTACAG
CGTGTAGTCG ATAAACTCAA TGGTGACTCG CCGCTTAAGT TTGTGATCTT GTGCGATGAT
GACGTGAATA TCCATGACTG GAATGATGTG ATCTGGGCAA TGACCACACG CATGGATCCG
GCACGTGATA GCTTACGAAT CGTTGGCCAA GATTTGATCT GCTTTGATGC AACCAATAAA
CTGCCTGACG AAGTCGAACG TGAATGGGGT ACTCCGATCC GAAAAGATCC TAAGCTAGTC
GCGAAAATCG ATTCGTTATG GGATGAGTTA GGCATTGTAT GA
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| Protein sequence | MNFKDLRDFL DYLEQRGELK RITHPIDPHY EMTEISDRTL RAKGPALLFE NPLGYDFPVL
TNLFGTPERV AMGMGRQQVQ ELRDVGQWLA YLKEPEPPRG LKELIEKLPV FKQVLNMPVK
RLRRAPCQEI VWQGDAVDLD KIPVMSCWPD DVAPLLTWGL TITRGPHKKR QNLGIYRQQK
IARNKVIMRW LAHRGGALDL RDWMEKHPGE PFPVSVAFGA DPATILGAVT PVPDTLSEYA
FAGLLRGSRT EVVKSISNDL EVPASAEIVL EGYIDPNEFA DEGPYGDHTG YYNEVERHHV
FTVTHVTMRN KPIYHSTYTG RPPDEPAVLG VALNEVFVPI LQKQFPEIAD FYLPPEGCSY
RMAIVTLKKQ YPGHAKRVML GVWSFLRQFM YTKFVIVCDE QVNARDWPQV IAAMVNHMSP
LRDTLFIEHT PIDSLDFASP VVGLGSKIGL DATAKWPAEL AVSNSDQSDK TTELSLEALK
ACLSDEADVL DVALPEAAND KLVLLLINKQ EAGQAQQLLQ RVVDKLNGDS PLKFVILCDD
DVNIHDWNDV IWAMTTRMDP ARDSLRIVGQ DLICFDATNK LPDEVEREWG TPIRKDPKLV
AKIDSLWDEL GIV
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