Gene VC0395_A2692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2692 
Symbol 
ID5135499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp2849353 
End bp2849982 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content51% 
IMG OID640534140 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_001218570 
Protein GI147675462 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGGT TATTACGCCG TTATTGGCAC GCGAAACTCA AAGGTTCTCC CTATCAACGG 
CTGTTTGAAA CCGCGCGCCA TCACGAGTAC GTCTCGCTCG ACTGTGAAAC CACCAGCTTA 
GATCCTAAAC GCGCTGAGTT AGTGACCATC GCCGCAACCA AGATCGTTGA TAACCGCATT 
ATCACCAGTC AACCCTTTGA GGTGCGCCTG TGCGCGCCAC AATCGCTCGA CTCGGGTTCA 
GTGCGGATTC ACCGTATCCG CCACCAAGAT CTGCACGATG GTCTGAGCGA AAAAGAGGCG 
CTTCTCCAAC TGATTGAGTT TATTGGCAAT CGTCCCTTGG TCGGCTACCA CATTCGTTAC 
GATAAGACGA TTTTGGATAT CGCCTGTCGT AAACATCTCG GGTTTCCACT CCCCAACCGA 
CTGATTGAGG TGAGCCAGAT CTATCACGAT AAACTGGAAA AACACCTGCC CAATGCCTAT 
TTCGATCTCA GTTTAGAGGC GATCTGCCGC CATCTGGATC TGCCACTGCA AGACAAACAT 
GATGCGCTGC AAGATGCGAT TGCCGCCGCT TTGGTGTTTG TGCGTTTAAC CAAAGGCGAT 
CTGCCACAAT TTATTGCACC GGGTGTGTAA
 
Protein sequence
MNWLLRRYWH AKLKGSPYQR LFETARHHEY VSLDCETTSL DPKRAELVTI AATKIVDNRI 
ITSQPFEVRL CAPQSLDSGS VRIHRIRHQD LHDGLSEKEA LLQLIEFIGN RPLVGYHIRY 
DKTILDIACR KHLGFPLPNR LIEVSQIYHD KLEKHLPNAY FDLSLEAICR HLDLPLQDKH 
DALQDAIAAA LVFVRLTKGD LPQFIAPGV