Gene VC0395_A2666 details

Gene Information

• Locus tag: VC0395_A2666
• Symbol: edd
• ID: 5136893
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2822018
• End bp: 2823814
• Gene Length: 1797 bp
• Protein Length: 598 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640534114
• Product: phosphogluconate dehydratase
• Protein accession: YP_001218544
• Protein GI: 147673653
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR01196] 6-phosphogluconate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCATC CTATTTTAGC CAAGGTCACT CAAAACCTGA TTGAGCGTAG CCGTGAAGCA 
CGTGCGGCCT TCATTGCACG CAGTCAAGCA CAAGAAAAAG CCGGCAAAGG TCGCACCTCA 
CTCTCTTGCG GTAATTTAGC CCACGCAGTG GCGGCTTCTT GCAGCACAGA GAAAAAAGCG 
ATCCTCGATT TCACGCGCAG TAATGTGGCG ATTGTGACGT CCTATAACGA TATGCTCAGC 
GCGCATCAGC CTTATCAGCA CTATCCAGAC CGCATCAAGA TGGTGTTAGC CGAGTACGGC 
CATACCGCAC AGGTCGCCGG TGGCGTACCC GCCATGTGCG ATGGCGTGAC CCAAGGTCAG 
CCGGGGATGG ATATGTCGCT GTTTTCCCGT GATTTGATTG CGCAGGCGAC CGCACTCTCC 
CTTAGTCACA ATGTGTTTGA TGCCACTTTG CTGCTCGGGA TCTGTGACAA AATCGCGCCG 
GGGCAATTGA TGGGCGCGCT CTCGTACGCC CATCTGCCGA CTGCGTTTAT GCCTGCGGGT 
TTAATGGCAA CCGGCATCAG TAACGAAGAG AAAGTGGATA TTCGTCAAAA GTATGCGGCG 
GGTGAAGTGG GTAAAGACGC ACTACTGAAT ATGGAGTGTC AGGCTTACCA CGCGCCGGGT 
ACGTGTACTT TCTACGGCAC CGCCAACACC AACCAATTGG TGTTTGAAGC CATGGGGCTG 
ATGTTGCCGG GTTCGGCGTT CGTGCATCCT CATTCGGCGC TGCGCCAAGC ATTGAACGAT 
GACGCGACGG TAAAAATTGC CAGCATGACC CAAGGTTCAG CGCAGTATCG TCCGCTCTAT 
CAAGTGGTCA CCGAGAAAAG TCTGCTCAAT GGGATTGTCG CTCTGCTGGC TTCTGGTGGC 
AGTACGAACC ACACCATTCA TATGTTGGCG GTGGCACGTG CCGCGGGGAT TTTGCTGACC 
TGGCAGGACA TCAGTGATCT GTCGGATGTG GTTCCACTGT TGGCGAAGGT TTACCCGAAT 
GGCCCCGCGG ATATGAATGC CTTCCAACAA GCGGGTGGTG TACCCGCGCT GATGAAGCGT 
TTGCATGAAG CCAAGTTGCT GCACTCGGAT GTCACACCGG TATTTGGTGA GTTTAGTGAT 
CAACTGACGC TGCCTGAGTT GGTGGATGGC GAGCTGCGTT GGGTTGCGTG TGATGGCACG 
CATGATGCGC AAGTGATCGC GGCGAGTGGC GAGTGCTTCC AAACCACTGG CGGCACTAAA 
ATGCTGAACG GGAACTTAGG CCGCGCGGTG ATCAAAGTTT CGGCGGTGAA AGAAGAACAA 
CGCATCATTG AAGCGCCGGC GGTAGTTTTC CAGTGCCAGC ACGAAGTAGA AGCGGCTTAC 
CAGCGTGGTG AACTGAATAA AGACTGCATT GTGGTGGTGA CCCACAATGG CCCGGCAGCC 
AATGGTATGC CTGAGCTGCA CAAATTGATG CCGATTTTAG GTAACGTGCA AAAAGCCGGA 
TTCAAAGTCG CGCTGGTGAC CGATGGCCGT TTGTCGGGCG CGTCAGGTAA AATTCCATCG 
GCGATTCACG TGTCACCAGA AGCGGTACGC GGCGGTGCGA TTGGCTTAGT GCGTGATGGG 
GATTTGCTGC GCTTGGATTG CACAACAGGC ACGCTTGAGA ACTTAACCGA CATGAGCCAT 
CGCCAAGCTC TCGCTTTAGA TACCGAGCGC GATCAGCAAA TGTGGGGACG CGAATTGTTT 
AAAGTGATGC GCCAAGCGGT CTCTTCCGCC GAACAAGGGG CGAGCTTTAT TGTTTAA 

 

Protein sequence

MIHPILAKVT QNLIERSREA RAAFIARSQA QEKAGKGRTS LSCGNLAHAV AASCSTEKKA 
ILDFTRSNVA IVTSYNDMLS AHQPYQHYPD RIKMVLAEYG HTAQVAGGVP AMCDGVTQGQ 
PGMDMSLFSR DLIAQATALS LSHNVFDATL LLGICDKIAP GQLMGALSYA HLPTAFMPAG 
LMATGISNEE KVDIRQKYAA GEVGKDALLN MECQAYHAPG TCTFYGTANT NQLVFEAMGL 
MLPGSAFVHP HSALRQALND DATVKIASMT QGSAQYRPLY QVVTEKSLLN GIVALLASGG 
STNHTIHMLA VARAAGILLT WQDISDLSDV VPLLAKVYPN GPADMNAFQQ AGGVPALMKR 
LHEAKLLHSD VTPVFGEFSD QLTLPELVDG ELRWVACDGT HDAQVIAASG ECFQTTGGTK 
MLNGNLGRAV IKVSAVKEEQ RIIEAPAVVF QCQHEVEAAY QRGELNKDCI VVVTHNGPAA 
NGMPELHKLM PILGNVQKAG FKVALVTDGR LSGASGKIPS AIHVSPEAVR GGAIGLVRDG 
DLLRLDCTTG TLENLTDMSH RQALALDTER DQQMWGRELF KVMRQAVSSA EQGASFIV