Gene VC0395_A2630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2630 
Symbol 
ID5136853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2782580 
End bp2783704 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content42% 
IMG OID640534079 
Productiron-containing alcohol dehydrogenase family protein RfbM 
Protein accessionYP_001218509 
Protein GI147674827 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAAC TACGTTTCCC ACTACCTGTA TTCCGTAACG CCCGAGAAAT CGCTAATGGC 
AGGAATGCCC GAATGGCGTT AAAAGGTTTA GTAGCTAACC GAGCTGCACT TATTATTAGC
CCTTCCTTTG GGAGTTCTCA GTACTTTGAA CAAGTCGTTC GCCTTATTAA CGCACAAAGT
GTCCGGGTGA TAGAGCGCTC TTGGCAAGGA GAACCAAGTG TAGAGGAACT TTCTGGAGTT
ATTGGAGAGC TTGAAGATTT TAAGCCAGAC TATATTCTTG CACTTGGCGG CGGTTCTATC
ATTGATGGAG CTAAGCTCGC TTGGTTATTC TACGAATGCC CAACTCTTGA ATCAGAACTT
CTATATCGAC CATTTGCATT GCCATCCCTT CGTGGTCGCG CAAAATTTGC TGCAATACCA
ACAACGGTAG GGGCTGGCTC TGAAGTTTCA TCCGCTGCTG TCATGCTTGA TAGTGTTACA
AACAGCAAAA AGGCAGTTGT CACTCATGAT TTTTTACCAG ACTTAGTGAT CCTTGATCCT
GACTTGGTTT CAGAAGTTCC ACCTAAGGTA TTGAAAACAA CTGTGGCCGA TGCTCTCTCT
CACGCCATTG AAGGTTATGT CTCTTTGATT GATAACCCTT TGATGAATAC TTTTGCTGAG
CAGGCGGTAT CAATAATCTA CCGCTATCGA CATCAATTTT CCAATGATAA TTGGAGCAGC
GAAATGCTTT CTGAACTGCA ACAAGCTGCT ATGTTTGCAG GGTGGGTTCA AAATCATTGC
ATAGTTGGTC TTTCACATGC CATTGCTCAC CAGCTAGGTA CGTTTAATAT AGGCCACGGA
TTGGCGAACG GTTTATTAAT GCCTGCGGTG ATCAACTTTA ATTACCGCGA ACATACAGCT
GCAACTAAGT ATGAACAATT GATCTATAAA TCCGGGTTAC CTAATAAAGA AGCATTATTA
GAACTTTTTG AAGTATTGGT AGGAGAACAG AAAACTGATA TGCATTTTTC AGAACAACAG
CTGACAACGA TCGCTGAAAA TGCTTTACTT GACCCTGCTG CTAAGTCAAA TCCTGTTCGA
TTTACAGAAA ACGATGTGAA AGAGATTGTG AAGCAATGCC TGTAA
 
Protein sequence
MLKLRFPLPV FRNAREIANG RNARMALKGL VANRAALIIS PSFGSSQYFE QVVRLINAQS 
VRVIERSWQG EPSVEELSGV IGELEDFKPD YILALGGGSI IDGAKLAWLF YECPTLESEL
LYRPFALPSL RGRAKFAAIP TTVGAGSEVS SAAVMLDSVT NSKKAVVTHD FLPDLVILDP
DLVSEVPPKV LKTTVADALS HAIEGYVSLI DNPLMNTFAE QAVSIIYRYR HQFSNDNWSS
EMLSELQQAA MFAGWVQNHC IVGLSHAIAH QLGTFNIGHG LANGLLMPAV INFNYREHTA
ATKYEQLIYK SGLPNKEALL ELFEVLVGEQ KTDMHFSEQQ LTTIAENALL DPAAKSNPVR
FTENDVKEIV KQCL