| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2630 |
|---|
| Symbol | |
|---|
| ID | 5136853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 2782580 |
|---|
| End bp | 2783704 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640534079 |
|---|
| Product | iron-containing alcohol dehydrogenase family protein RfbM |
|---|
| Protein accession | YP_001218509 |
|---|
| Protein GI | 147674827 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAC TACGTTTCCC ACTACCTGTA TTCCGTAACG CCCGAGAAAT CGCTAATGGC
AGGAATGCCC GAATGGCGTT AAAAGGTTTA GTAGCTAACC GAGCTGCACT TATTATTAGC
CCTTCCTTTG GGAGTTCTCA GTACTTTGAA CAAGTCGTTC GCCTTATTAA CGCACAAAGT
GTCCGGGTGA TAGAGCGCTC TTGGCAAGGA GAACCAAGTG TAGAGGAACT TTCTGGAGTT
ATTGGAGAGC TTGAAGATTT TAAGCCAGAC TATATTCTTG CACTTGGCGG CGGTTCTATC
ATTGATGGAG CTAAGCTCGC TTGGTTATTC TACGAATGCC CAACTCTTGA ATCAGAACTT
CTATATCGAC CATTTGCATT GCCATCCCTT CGTGGTCGCG CAAAATTTGC TGCAATACCA
ACAACGGTAG GGGCTGGCTC TGAAGTTTCA TCCGCTGCTG TCATGCTTGA TAGTGTTACA
AACAGCAAAA AGGCAGTTGT CACTCATGAT TTTTTACCAG ACTTAGTGAT CCTTGATCCT
GACTTGGTTT CAGAAGTTCC ACCTAAGGTA TTGAAAACAA CTGTGGCCGA TGCTCTCTCT
CACGCCATTG AAGGTTATGT CTCTTTGATT GATAACCCTT TGATGAATAC TTTTGCTGAG
CAGGCGGTAT CAATAATCTA CCGCTATCGA CATCAATTTT CCAATGATAA TTGGAGCAGC
GAAATGCTTT CTGAACTGCA ACAAGCTGCT ATGTTTGCAG GGTGGGTTCA AAATCATTGC
ATAGTTGGTC TTTCACATGC CATTGCTCAC CAGCTAGGTA CGTTTAATAT AGGCCACGGA
TTGGCGAACG GTTTATTAAT GCCTGCGGTG ATCAACTTTA ATTACCGCGA ACATACAGCT
GCAACTAAGT ATGAACAATT GATCTATAAA TCCGGGTTAC CTAATAAAGA AGCATTATTA
GAACTTTTTG AAGTATTGGT AGGAGAACAG AAAACTGATA TGCATTTTTC AGAACAACAG
CTGACAACGA TCGCTGAAAA TGCTTTACTT GACCCTGCTG CTAAGTCAAA TCCTGTTCGA
TTTACAGAAA ACGATGTGAA AGAGATTGTG AAGCAATGCC TGTAA
|
|---|
| Protein sequence | MLKLRFPLPV FRNAREIANG RNARMALKGL VANRAALIIS PSFGSSQYFE QVVRLINAQS
VRVIERSWQG EPSVEELSGV IGELEDFKPD YILALGGGSI IDGAKLAWLF YECPTLESEL
LYRPFALPSL RGRAKFAAIP TTVGAGSEVS SAAVMLDSVT NSKKAVVTHD FLPDLVILDP
DLVSEVPPKV LKTTVADALS HAIEGYVSLI DNPLMNTFAE QAVSIIYRYR HQFSNDNWSS
EMLSELQQAA MFAGWVQNHC IVGLSHAIAH QLGTFNIGHG LANGLLMPAV INFNYREHTA
ATKYEQLIYK SGLPNKEALL ELFEVLVGEQ KTDMHFSEQQ LTTIAENALL DPAAKSNPVR
FTENDVKEIV KQCL
|
|---|
| |