Gene VC0395_A2614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2614 
Symbol 
ID5135363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2764972 
End bp2765760 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content44% 
IMG OID640534063 
Producthypothetical protein 
Protein accessionYP_001218493 
Protein GI147673039 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3774] Mannosyltransferase OCH1 and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATGA GCAAAGTAAC CGTATTGATC GCCAACCGAC TGATTCGTCT GACTGGCAAC 
CTATTTAAAA TGCTCTCTTA CCCATTTCAT TGGGTGTTTC CAAAGCTGCG TTTTACGATT
CCCGCTTACT CACCAGCTAA GCTAAAAATG CGCGCCAATG CCACCATTCC ACGCACTATT
TGGCAAACCA ACTTTACCGA TCAAGCCTCA CTACCGGTTT ACCTTAACTA TCTGTTTAAC
CGCCTCATGT CGCTCAACTG TGACTATCGC TATGTGAGTA CCGAAGCACG TGGGGAATTC
TTAAAAGAAC ATACATCACC AGAAGTTTAT GATGCTTACT CTCGCCTCAC TAACGGTGCA
GCCCAAGCTG ACTTATGGCG TTTAGTGGTA CTCAATACCT ATGGTGGTGT GTATATGGAT
ATTGATGCCA CGCTAGTATG GCCGCTCGAT AAGCTGCTCG GCGACTCACA AGAGCTGTAT
ATTCGCATTA AAAATAATAC CGAGATCACT AACTACTTCA TTGCAACTGC ACCAAACAAT
CCAGATCTAC AGGCCACCAT TGAACAGGTG GTTTATAACG TGAATCACTA CGAGCCTTCC
ATGGGGGTGT ATCACTCCAC AGGACCAACG GTACTCAATA ACATCTTGTC AGCTAAAGCG
GTGATTCACA CTCAAGACCG TAAATACGTA TGTATTCAGG GCACCTTTAC CAATGAACAC
TTCCAGTACA TTGATAAACC TCGTGGTAAA TGGACACACA TCAATCCCGA AGATCTCGTG
AAAAAATAA
 
Protein sequence
MNMSKVTVLI ANRLIRLTGN LFKMLSYPFH WVFPKLRFTI PAYSPAKLKM RANATIPRTI 
WQTNFTDQAS LPVYLNYLFN RLMSLNCDYR YVSTEARGEF LKEHTSPEVY DAYSRLTNGA
AQADLWRLVV LNTYGGVYMD IDATLVWPLD KLLGDSQELY IRIKNNTEIT NYFIATAPNN
PDLQATIEQV VYNVNHYEPS MGVYHSTGPT VLNNILSAKA VIHTQDRKYV CIQGTFTNEH
FQYIDKPRGK WTHINPEDLV KK