| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2569 |
|---|
| Symbol | |
|---|
| ID | 5136967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 2717317 |
|---|
| End bp | 2718156 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640534018 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001218448 |
|---|
| Protein GI | 147674499 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2961] Protein involved in catabolism of external DNA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTAAGTT ACCGACACAG TTTCCACGCA GGCAATCATG CGGATGTGCT CAAGCACATC
GTACAGAGCC TGATCCTCAA TTCTCTGCAA CAAAAAGAGA AACCTTTTGT CTACCATGAT
ACTCACTCTG GCGTAGGTCG TTACGATCTG ACCCATGAGT GGTCGGAAAA AACCGGCGAA
TACAAGCAAG GCATTGCCCG CGTTTGGCAA CAAGACAACA TTCCGGCGGA GCTCGATAGC
TATCTGGATG CGATTCGCCA GCTCAATCAA GGGGAAACAC TGCGTTACTA CCCGGGTTCA
CCTCGAGTCG CCCGCGCCCA TCTGCGTGAG CAGGATCGCA TGGTACTGAC TGAGCTGCAT
CCAAGCGATT ACCCATTGCT GGAGCAAGAG TTTCACCGCG ATCGCCAAGT CTCTATCTAT
AAAGAAGATG GCTTCGCACG CCTGAAAGCC AGTTTGCCGC CGCAAGAACG CCGCGGTTTA
GTGCTGATTG ACCCGCCTTA TGAGCTGGCT AAAGAGTACC GCGATGTGGT GCGCGCTATC
GCTCAGAGTT ACAAACGCTG GGCAACGGGT ATTTATGCGA TTTGGTATCC AGTGGTCAAT
CGCTGCGATA TCGATGACAT GTTAGAAGGC TTGCAAGGCT TAGAGATTCG TAAAATCTTA
CAAATTGAAC TCGGTGTCGC GCCAGATACC AATGAGCGCG GCATGACCGC CTCGGGCATG
ATAGTGATTA ATCCGCCATG GACGCTGGAA AGCCAGATGC AGACCATTTT GCCTTTCCTC
AAACAGGCGA TTGCCCCCGC TACTGGACAC TATAAAGTCG AGTGGGTGGT ACCAGAATAA
|
|---|
| Protein sequence | MLSYRHSFHA GNHADVLKHI VQSLILNSLQ QKEKPFVYHD THSGVGRYDL THEWSEKTGE
YKQGIARVWQ QDNIPAELDS YLDAIRQLNQ GETLRYYPGS PRVARAHLRE QDRMVLTELH
PSDYPLLEQE FHRDRQVSIY KEDGFARLKA SLPPQERRGL VLIDPPYELA KEYRDVVRAI
AQSYKRWATG IYAIWYPVVN RCDIDDMLEG LQGLEIRKIL QIELGVAPDT NERGMTASGM
IVINPPWTLE SQMQTILPFL KQAIAPATGH YKVEWVVPE
|
|---|
| |