Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2377 |
Symbol | |
ID | 5137150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2533438 |
End bp | 2534067 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640533829 |
Product | hypothetical protein |
Protein accession | YP_001218277 |
Protein GI | 147675359 |
COG category | [S] Function unknown |
COG ID | [COG3714] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.549446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCATGT TGAGCTGGAT TTCTGTCGTG TTGTCGGGGT TTATCAGCAT TTCTACTTAT GAAAATCAGA AGCTTAAGCA AGCGATATTC TTTCGAATCT TCAGCCTCCT GTTACTGACA ATTATTGTGT GGGAGCAGCA CAGTCATGCC ACGCCAGAGG TGATTTTTAT CTCTCTTGGT TTGGCGGTGT CGATGTTTGC GCATGGACTG CGGCTAAATC ATCGCTACCA CAAAGCCAGC TTTGTGCTGT TTTTAGTCGC GCAACTGCTG TTTAGTAAAG CATTCTGGGT GCAATTGTCG GGGAGTATGG TGTGGTGGTT GCCCGCATTA CTGGTGGCGG CAAGCATAGT GGCGTTTTTT TTGTTACTGC CACAAATTGA TACCTTAATC TTCCCGGTCA CCATTATGGG GTTGATGTTA GTACAGATGA CGTGGGCTGC GGGTGAACTG TGGCTACAAG AGGCCACCGT GGCTTCTGGC GCTGGTTTCT TAGGATGTCT GGTTTATATC CTCTCGGCCA CGTTATTAGC CATCCACGAT TATCGGCGTC CACTTCCTTG GGGGCACACT CTTATCTCCA GCTCCTACTT GATAGCCCAA GCCTTGATCT CAGCGTCGAT CGTGTTTTAG
|
Protein sequence | MSMLSWISVV LSGFISISTY ENQKLKQAIF FRIFSLLLLT IIVWEQHSHA TPEVIFISLG LAVSMFAHGL RLNHRYHKAS FVLFLVAQLL FSKAFWVQLS GSMVWWLPAL LVAASIVAFF LLLPQIDTLI FPVTIMGLML VQMTWAAGEL WLQEATVASG AGFLGCLVYI LSATLLAIHD YRRPLPWGHT LISSSYLIAQ ALISASIVF
|
| |