Gene VC0395_A2355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2355 
Symbol 
ID5136230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2507217 
End bp2508593 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content41% 
IMG OID640533807 
Producthypothetical protein 
Protein accessionYP_001218255 
Protein GI147673584 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAG TACAGATTGC TGGTGCAGGT GCTGGGAAAA CTTATGGCTT AGCAAAGACT 
TTGATAGAGC ACATCGAAGC TTGTACTAGT CACAAAAAGA CATTTGCACT GACGTACACA
AACTCTGCAA CAGCGAAGAT AGAACAAGAG ATAATCAAAC AGCATGGCTT TATTCCGTCG
AATCTCTGTA TACAGACCGT ACATAGCTTC TTGTTAAACG AAATCATCTA CCCATTCTCG
TCATTCACTC TCGGAGATGT GTATAACGAC GCATCAATAA TGATGTTACC GAGCGATGCT
AGATTCAAAA ACTGGCACTT AAAACGATTA AAAGATAAGA ACGTCATTCA TGCCGAGAGC
GTATACAACA TCGCTAAACA AATTGTTGAT GAAACCATCA GCAAGCACAA TAACAGAGCG
AAGAAAGCAA AAGTCCGCAG ACTATTGGCT ATTCTAGGAA GCTGCTTTGA CAAGATATTC
ATCGATGAAG TCCAAGACTT AGACAAAGAT GCACTCCGTT TTTTCGAAGT TCTAGGGTGC
AACGATATTG ATGTGTATAT GATCGGAGAT CCAAAACAAG CCATCAAGTT TCCCCAAGAT
CTTGATGCTT TCGTTCGAAA AGTAGCTCCA AAAGAATACG CGACTATACT ACCGATCAAC
AATCAAACCA GACGAGTACC CACAGAGATA CTAGCGGTCT CAAACAGCTT CTGTTATGAA
GGTCAACAAC AAGAGTCACT ATCAGAAATG GTTGGTGAAC TCATGTACAT TGAATCGACG
GACGGACGAT ATGACGAGCT ACTAACGAAC TACTTAGATA CAAAACAACT TGTTTGTATC
GACAAAAAGA ATGGTCGCTA TACCACTTCG TCTAAACACA AACACGCATT CCCACGAGAG
ATCGAGGAAA TGATTCGTGA TTCTAACCAC AAGAAAGACA AAGCTTTGTT TGTTAAAGCA
GCTTTTTCTG ACTTTATGGA CGATGTCGCC GAAGTCGGTG CAAGAATTGC TATCAATAGG
CTAAAAACCA GTCATGGCTT GACACTTAGT AAACAACACT TAGCCCAATT ACTTGAGCTG
TGCAATTCTT GTACGGGACA TGACGTTCAA TTCAAAGTCC AAAGTATCGA ATCTATCAAG
GGATTGGATG CTGATGTGTG TGTAATCATA CTTAGCTCTA ATACCCTAAA ATACTTGACC
CAAAATGCTA TTAGCGAAGC AAACCGATTT AATAAAGAAT GGAAAAAGGT CTATGTCGCT
CTTACTCGTG CCAAGAAGAG GTTGGTATTG GCTTTAGATC ACGAGTTACT CGCTAAAGAA
GATATGGCGG CTGTTAGGGA CTCCATTGGT GAACTGGGAT TCGTTACTCA TAACTAG
 
Protein sequence
MIEVQIAGAG AGKTYGLAKT LIEHIEACTS HKKTFALTYT NSATAKIEQE IIKQHGFIPS 
NLCIQTVHSF LLNEIIYPFS SFTLGDVYND ASIMMLPSDA RFKNWHLKRL KDKNVIHAES
VYNIAKQIVD ETISKHNNRA KKAKVRRLLA ILGSCFDKIF IDEVQDLDKD ALRFFEVLGC
NDIDVYMIGD PKQAIKFPQD LDAFVRKVAP KEYATILPIN NQTRRVPTEI LAVSNSFCYE
GQQQESLSEM VGELMYIEST DGRYDELLTN YLDTKQLVCI DKKNGRYTTS SKHKHAFPRE
IEEMIRDSNH KKDKALFVKA AFSDFMDDVA EVGARIAINR LKTSHGLTLS KQHLAQLLEL
CNSCTGHDVQ FKVQSIESIK GLDADVCVII LSSNTLKYLT QNAISEANRF NKEWKKVYVA
LTRAKKRLVL ALDHELLAKE DMAAVRDSIG ELGFVTHN