Gene VC0395_A2140 details

Gene Information

• Locus tag: VC0395_A2140
• ID: 5136587
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2298721
• End bp: 2299290
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640533596
• Product: hypothetical protein
• Protein accession: YP_001218056
• Protein GI: 147674395
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.340866
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGCAC AGTTTCACGC TTATCTAAAA CAGCATGGTT TTTCCGATGC CGAATGCACG 
CAATTGCAAA GTGTCGCTCA GCCACTCGAG CTGCCAACAC GACATGTCCT GGTCGCACAA 
GGAGAAACCA CTCCCTTTGC CTATTGGGTG CTCGCTGGGC TATGCCACGC TTGCTATCTC 
ACCGAAGAGG GCAAAAGTTT CAGTAAAGAG TTTTATTGGG AGCAAGACTG GGCGATTGGT 
TTTGAAAGTT TGCTGCGTGA GCAAGCCTCA CCCTTCATGT TGGAAACCTT ATCTCCAGTA 
AAACTGATGG GCGTACCGAT TGAGGTGTTA CGTGAATGGC GCTCTAGCGG TCACCCGCTC 
TATCAACGTT TACTTGAGAC GCAACTGCTG TACAAGGAGC AAAAAGAGCG CTTTATGTTG 
CTCTATCGCC CAGAACAGCG TTACCAAGTG ATGTGTGCTC AGTTTCCAGA TTTGATGGCG 
CGGCTTTGCG ATCATCACAT CGCCGCGTAT TTGGGGATAA CGCCAATTAG CCTCAGCCGC 
ATTAAAGCGC GGCTGAGACA GGATGCGTGA 

 

Protein sequence

MQAQFHAYLK QHGFSDAECT QLQSVAQPLE LPTRHVLVAQ GETTPFAYWV LAGLCHACYL 
TEEGKSFSKE FYWEQDWAIG FESLLREQAS PFMLETLSPV KLMGVPIEVL REWRSSGHPL 
YQRLLETQLL YKEQKERFML LYRPEQRYQV MCAQFPDLMA RLCDHHIAAY LGITPISLSR 
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