| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2133 |
|---|
| Symbol | |
|---|
| ID | 5136741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 2290536 |
|---|
| End bp | 2291057 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640533589 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001218049 |
|---|
| Protein GI | 147673765 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3495] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTT TTATGTTGAT AGCGAGCCTC ATCATGGCGA CGCTGTTCTC AACGCCACTA
TTGGCTAATC AAGACACCAC TGCTAGTGAG CAGGATGTAT TACAACTCGA CTGGCTCGAT
CTCATTCCAG AGAATGAGCG CAACTTGTTT GATCAACAAG GTATGCCGAT GCCGGATCAT
AACGGTAATG AACCAGCCAA GCAGCAACAG ATTGGCACGG TCCGTAAGGA GCTGAACGGC
AGTCGGGTCA AAATCCCCGG CTTTGTGATC CCGCTTGAAG GCGATGATAA AAAGGTCACC
GAGTTTTTAT TGGTGCCTTA CTTTGGTGCG TGTATTCACG TGCCACCACC GCCACCTAAC
CAGATTATTT ACGTCAAGTT TCCTAAAGGT GCTCCGATCC AAGAGCTGTG GGATGTGATT
TATGTGATTG GGGAATTGAA AACCGAATCA CTCAGTCATG ATCTAGCGGA AACGGCTTAC
ACCATTATCG GTACTGAGAT CGCCGAATAC GACGATATGT AA
|
|---|
| Protein sequence | MKRFMLIASL IMATLFSTPL LANQDTTASE QDVLQLDWLD LIPENERNLF DQQGMPMPDH
NGNEPAKQQQ IGTVRKELNG SRVKIPGFVI PLEGDDKKVT EFLLVPYFGA CIHVPPPPPN
QIIYVKFPKG APIQELWDVI YVIGELKTES LSHDLAETAY TIIGTEIAEY DDM
|
|---|
| |