| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2098 |
|---|
| Symbol | |
|---|
| ID | 5136826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 2257071 |
|---|
| End bp | 2257400 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640533554 |
|---|
| Product | putative anti-sigma B factor antagonist |
|---|
| Protein accession | YP_001218014 |
|---|
| Protein GI | 147675756 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3113] Predicted NTP binding protein (contains STAS domain) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATC CACAATGGTC TGCCGAGAAT GAACACCAGT TCAGTTTAAT TGGCGAACTG
GATCGAGAAA CGGTACCCAA ATTGTGGATC TTTCTCAAAA ATTGGCAGCC GCAAGTGAAG
CAAATCGAGC TTTCTTTGCA ACAAGTTGTC AGAATTGACT CTGCGGGAAT GGTGCTGTTA
ATTCACTTAA TAGAGCATGC AAAAGTGAGA AACTGTCATA TAATGCTCAG CTTCGTGCCA
GAACAACTGC GCACACTGTT TCAGTTGAGC AATATTGAAC ATCTGATGTC TCAACACATA
GCCAAACCAG CAGAGGTGAA TTGTGGATAG
|
|---|
| Protein sequence | MSHPQWSAEN EHQFSLIGEL DRETVPKLWI FLKNWQPQVK QIELSLQQVV RIDSAGMVLL
IHLIEHAKVR NCHIMLSFVP EQLRTLFQLS NIEHLMSQHI AKPAEVNCG
|
|---|
| |