| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2090 |
|---|
| Symbol | |
|---|
| ID | 5135703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 2249987 |
|---|
| End bp | 2251363 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640533546 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001218006 |
|---|
| Protein GI | 147674923 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.113617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGATA CCGATCGGAA ACTGTTTGTA CTGGATACCA ATATCCTACT CCACGAACCT
CTCGCGATTT ACTCTTTTAA AGAGCACGAC GTGGTCATCC CAATGACCGT TCTTGAAGAA
CTTGACCGAA TCAAAGACAG CAAACGCGAT GTGGCGCGCG ATGCACGCGT AGCGATTCGG
GCTTTGGAAC ACTTATTCCA CGATGCCACT CCCGAAGAAA TCACCGAAGG GATCCCGCTT
TCTAAGCAAG AGGGCGCAAC AGGAACCATC TCGATCCTCG CCGATTATGA ACTGGATGAA
ACCGTCAAAG CCTTTACCGA CAAAGAGGGC GATAACCGGA TCCTCAATGC CGTGCTTTAC
CTGCAAGCTC AGCGTACACC ACGCGCCGTG GTGCTGGTGA CTAAAGACAT CAACATGCGT
TTGCGCGCCA AAGGTGCAGG CGTGTTGTAT GTGGAAGACT ACCGCACCGA CCAACTGATT
GATGATATTC AATATCTGAC CAAGGGCTTT CAAACTCGTC CCGGTAGTTT TTGGGACAGC
GTGGAAGATG TCGCGAGCTA CACGCTCGGT GGCAAAACCT TCCATAAGCT GGATCGTGCA
CCATTCGATC CAACCTTCCT CAACCAATAT GTCATTGATG AAGACAGCGA CTTTGCCGCG
CGGGTCGAAA CCATCGATGG CGATAAATTG ACGCTGCGCG ATCTGAGCCG TGAACGCATG
ATGCATCGCA AAGCGTGGGG CATCACCCCA AAAAATATCT ACCAAGGGAT GGCGCTGGAC
GCACTGCTCG ATCCGGATAT CGATCTGGTG ATCCTGACCG GTGCGGCGGG CAGTGGTAAA
ACCTTACTGG CGATGGCGGC AGCACTGGAG CAAACCGTCG AGCGCAAAAT GTTCGATAAA
ATCATCGTTA CTCGCAACAC CCCTGATATC GGCGAATCAA TTGGTTTCCT GCCCGGCACG
GAAGAGGAAA AGATGATGCC GTGGCTCGCT TCCGTCACCG ATACCTTAGA AGCGCTGCAT
AAAAATGATC ACTGTACCGA TGGCTCGCTC AAATACATCT GCGATAAAGC CAACATTCAG
TTTAAATCGA TCAACTTTAT GCGTGGTCGT TCAATCCAAA ACGCCTTCGT GCTGCTCGAT
GAGTGTCAAA ACCTCACCGC CTCGCAGATC AAAACCATCA TCACCCGCTG TGGTGAAGGC
ACCAAGATTG TCTGCTCAGG TAACTTAGCG CAGATTGACT CTCACTATTT AACCCCTGTC
ACCTCAGGCC TTACCTACAT GGTTGAGCGC TTCAAAAACT TTGAAGGCAG CGCCAACATC
CACCTCAATG GCGTAGTACG CAGCCGTTTG GCTGAATTCG CCGAAGAGAA TTTATAA
|
|---|
| Protein sequence | MGDTDRKLFV LDTNILLHEP LAIYSFKEHD VVIPMTVLEE LDRIKDSKRD VARDARVAIR
ALEHLFHDAT PEEITEGIPL SKQEGATGTI SILADYELDE TVKAFTDKEG DNRILNAVLY
LQAQRTPRAV VLVTKDINMR LRAKGAGVLY VEDYRTDQLI DDIQYLTKGF QTRPGSFWDS
VEDVASYTLG GKTFHKLDRA PFDPTFLNQY VIDEDSDFAA RVETIDGDKL TLRDLSRERM
MHRKAWGITP KNIYQGMALD ALLDPDIDLV ILTGAAGSGK TLLAMAAALE QTVERKMFDK
IIVTRNTPDI GESIGFLPGT EEEKMMPWLA SVTDTLEALH KNDHCTDGSL KYICDKANIQ
FKSINFMRGR SIQNAFVLLD ECQNLTASQI KTIITRCGEG TKIVCSGNLA QIDSHYLTPV
TSGLTYMVER FKNFEGSANI HLNGVVRSRL AEFAEENL
|
|---|
| |