| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1962 |
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| Symbol | |
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| ID | 5137033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2102874 |
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| End bp | 2103845 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640533419 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_001217886 |
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| Protein GI | 147673179 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTACTC TTAAAAGGAC AAAATTGAAT ATACTAACCA CATTAAGAGA GCAACTTTTA
ACAAACAATG TAATTATGCC TCAGGAGTTC GAGAGACTTG AGGTTAGAGG CTCTCATGCA
TATAAGGTAT ACTCAATTCC CAAAAGAAAA GCAGGGCGGC GGACAATCGC GCATCCTTCT
AGTAAGCTCA AAATTTGTCA GCGCCATTTG AATGCTATCC TAAATCCATT ATTGAAGGTA
CATGACTCAA GCTATGCATA TGTCAAGGGT AGAAGTATAA AAGATAATGC TCTAGTACAC
AGTCACTCTG CCTATGTATT AAAAATGGAC TTCCAAAATT TTTTTAATAG TATTACTCCA
ACCATTCTAC GACAATGTTT AATTCAAAAT GACATTCTAC TTTCAGTAAA TGAGTTAGAA
AAACTAGAAC AATTGATATT CTGGAACCCA AGTAAAAAAA GGAACGGAAA GCTAATATTG
AGCGTTGGAT CTCCTATATC ACCATTAATA TCCAATGCTA TTATGTACCC ATTTGACAAA
ATAATTAATG ATATATGCAC TAAGCATGGC ATTAACTATA CCAGGTACGC AGACGATATC
ACATTCTCAA CCAACATAAA AAACACTTTA AATAAGCTAC CAGAAATAGT TGAGCAGTTA
ATTATACAAA CATATGCTGG AAGAATAATA ATTAATAAAA GAAAAACCGT TTTCTCATCT
AAAAAGCACA ATCGTCATGT TACTGGTATA ACATTAACTA ACGATAGTAA AATATCAATA
GGAAGAAGTA GGAAAAGATA TATCTCTTCT CTAGTATTTA AATACATAAA TAAAAATCTT
GACATTGATG AAATTAATCA CATGAAAGGG ATGTTAGCGT TCGCATATAA TATAGAGCCT
ATATATATTC ATCGACTTAG CCATAAATAT AAAGTGAACA TCGTTGAAAA AATTCTCAGA
GGAAGTAACT AA
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| Protein sequence | MFTLKRTKLN ILTTLREQLL TNNVIMPQEF ERLEVRGSHA YKVYSIPKRK AGRRTIAHPS
SKLKICQRHL NAILNPLLKV HDSSYAYVKG RSIKDNALVH SHSAYVLKMD FQNFFNSITP
TILRQCLIQN DILLSVNELE KLEQLIFWNP SKKRNGKLIL SVGSPISPLI SNAIMYPFDK
IINDICTKHG INYTRYADDI TFSTNIKNTL NKLPEIVEQL IIQTYAGRII INKRKTVFSS
KKHNRHVTGI TLTNDSKISI GRSRKRYISS LVFKYINKNL DIDEINHMKG MLAFAYNIEP
IYIHRLSHKY KVNIVEKILR GSN
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