| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1939 |
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| Symbol | nfo |
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| ID | 5137726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2069166 |
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| End bp | 2070026 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640533396 |
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| Product | endonuclease IV |
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| Protein accession | YP_001217863 |
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| Protein GI | 147674847 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00102323 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGAGA AGTTAATCGG GGCACATGTA TCGGCCTCTG GTGGTGTCGA ACTCGCGCCA
GTTCGAGCTC ATGAAATCGG AGCGAATGCT TTTGCTCTCT TCACCAAAAA CCAGCGCCAA
TGGGCAGCTA AGCCACTGGA AGCGAGCAGC ATTCGTGCTT TCAAAGCCAA TTGTAAAAAA
TGGGGATTTG GCAGTGAGGC GATTTTGCCG CACGACTCTT ATCTGATTAA TTTAGGGGCT
CCAGAACCCG AGAAGCTCGA CAAATCACGA GCCGCTTTTG TCGATGAAAT GCTGCGTTGT
GATCAGTTAG GGTTAACTTT GCTTAACTTT CATCCCGGTA GTCATTTACA GCAGGTCTCG
GAAGAGGCGT GTTTAGCGAC AATTGCTGAG TCAATTAATC TTGCGCATCG TCAAGTACCG
AATGTGATTG CGGTGATTGA AAATACCGCA GGGCAGGGGA GTAACTTAGG TTGGCGTTTT
GAGCATCTGG CGGCAATCAT TGACCAAGTT GAGGATAAAG AGCGGGTTGG CGTATGCCTA
GATACTTGCC ACACCTTTGC CGCAGGGTAT GATTTGCGTA CGAAAGCCGC GTGTGATGAG
ACATTCGCTG AGTTTGAGCG AGTGGTCGGT ATGCACTATT TGCGCGCAAT GCACATCAAT
GATTCAAAAG GTAAGCTGGC TAGCCGCGTT GACCGCCATC ATTCCTTAGG TATGGGAGAG
ATTGGCTGGG AGTGTTTTGA ATATATCGCG CAAGATGCTC GATTTAACGG TATCCCTCTG
ATTTTAGAAA CGATTGATCC TGACATTTGG GCGACTGAGA TCGCAACGCT ACGCAAATTT
TCGACGCAAA AAGAGAATTA A
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| Protein sequence | MYEKLIGAHV SASGGVELAP VRAHEIGANA FALFTKNQRQ WAAKPLEASS IRAFKANCKK
WGFGSEAILP HDSYLINLGA PEPEKLDKSR AAFVDEMLRC DQLGLTLLNF HPGSHLQQVS
EEACLATIAE SINLAHRQVP NVIAVIENTA GQGSNLGWRF EHLAAIIDQV EDKERVGVCL
DTCHTFAAGY DLRTKAACDE TFAEFERVVG MHYLRAMHIN DSKGKLASRV DRHHSLGMGE
IGWECFEYIA QDARFNGIPL ILETIDPDIW ATEIATLRKF STQKEN
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