| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1869 |
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| Symbol | pepD |
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| ID | 5137624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1987265 |
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| End bp | 1988869 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533326 |
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| Product | aminoacyl-histidine dipeptidase |
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| Protein accession | YP_001217793 |
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| Protein GI | 147674070 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2195] Di- and tripeptidases |
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| TIGRFAM ID | [TIGR01893] aminoacyl-histidine dipeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.550605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCTACA CCCTGCCCCT GCACAGTGAT ATGCTGTGCA ACGAAAGTAC CTACCTGTTA
CAGGCAAATT CTCTGCCACG ACCCAGCTCT GGAGAGAGGA TACACGGGAA AAATTACAGT
AAGGAGTCAT CTGTGTCTGA GTTCCAAACC GAAATCAGTA AGTTATCGTC AAATCCAATT
TGGCCATTTT TCGCCACTAT CTGTTCCATC CCGCACCCTT CAAAACATGA AGAGGCATTA
GCTCAATACA TTATCAACTG GGCTAAAGAA CAAGGATTGG CCGTTCGTCG TGATGAGACC
GGTAACGTCT TTATTAAAAA GCCAGCGACA CCGGGCATGG AAAATCGTAA AGGTGTGGTA
CTTCAAGCGC ACATTGATAT GGTGCCGCAA AAAAATGAAG ACACAGTGCA TGATTTCACC
AAAGATCCGA TCCAGCCTTA TATTGATGGT GAATGGGTTA CTGCTAAAGG CACTACGCTT
GGCGCGGATA ATGGTATCGG CATGGCTTCT TGCCTAGCAG TACTGGCTTC TAAAGAGATC
CAACATGGTC CAATTGAAGT TCTGCTGACT ATTGATGAAG AAGCAGGCAT GACCGGCGCT
TTTGGCCTCA AAGAAGGTTG GCTGGAGGGC GACATTCTGC TCAATACCGA CTCTGAGCAA
GAAGGTGAAG TCTATATGGG CTGCGCGGGA GGCGTGAACG CCGAGTTCAC TTTCTCCATT
GAGCGTGAAG CGATCCCTGC TGGTTATGTT GGCCGCCAAC TGATCTTAAA GGGTTTGAAA
GGCGGTCACT CAGGTTGTGA TATTCACACT GGCCGTGGTA ACGCTAACAA GCTGATGGCG
CGCTTTCTCG CAGGCCATGC GAAAGAATTA GATCTGCGCT TAGTCGAATT CCGTGGCGGT
AGTCTACGTA ATGCGATCCC GCGTGAAGCT TTTGTCACCG TCGCCTTGCC AGAACAGCAC
GTAGCCGAAT TAGAAACCTT ATTCCACCGC TACACTGAGC TACTCAAAGC TGAACTGGGT
AAGGTTGAAA CTCACTTGGT AACTTTCCTT GAAGCCAAAG AACTGCAAAG TGAAGTGCTG
ACCGCGCACA CTCAACAACG TTTTGTTGCC GCTCTGAACA CGTGTCCAAA CGGTGTGATC
CGCATGAGCG ATGATATTGC AGGTGTTGTA GAAACCTCAC TCAACGTGGG AGTGATCACC
ACAGAAGCCA ACAAAATCAA AGTGCTGTGC TTGATTCGCT CCCTAATGGA CTCAGGCCGC
CACCAAGTCG AGGGCATGTT GCAATCGCTG GCACAACTTG CGGGGGCAGA GCTGGACCTT
TCTGGTGCTT ACCCTGGCTG GAAACCCGAT GCTGATTCTG AAATCATGCA TATTTTCCGT
GATATGTATG AAGGCATTTA TGGCCACAAA CCGAATATCA TGGTGATCCA CGCGGGTCTT
GAGTGTGGGC TGTTCAAAAA ACCCTATCCA AACATGGATA TGGTCTCTTT CGGTCCAACC
ATCAAGTTCC CACATTCACC GGATGAAAAA GTGAAGATAG ACACGGTTGA TCTGTTCTGG
CAACAGATGG TGGCACTACT CGCCAATATC CCAGTGAAAG CCTAA
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| Protein sequence | MTYTLPLHSD MLCNESTYLL QANSLPRPSS GERIHGKNYS KESSVSEFQT EISKLSSNPI
WPFFATICSI PHPSKHEEAL AQYIINWAKE QGLAVRRDET GNVFIKKPAT PGMENRKGVV
LQAHIDMVPQ KNEDTVHDFT KDPIQPYIDG EWVTAKGTTL GADNGIGMAS CLAVLASKEI
QHGPIEVLLT IDEEAGMTGA FGLKEGWLEG DILLNTDSEQ EGEVYMGCAG GVNAEFTFSI
EREAIPAGYV GRQLILKGLK GGHSGCDIHT GRGNANKLMA RFLAGHAKEL DLRLVEFRGG
SLRNAIPREA FVTVALPEQH VAELETLFHR YTELLKAELG KVETHLVTFL EAKELQSEVL
TAHTQQRFVA ALNTCPNGVI RMSDDIAGVV ETSLNVGVIT TEANKIKVLC LIRSLMDSGR
HQVEGMLQSL AQLAGAELDL SGAYPGWKPD ADSEIMHIFR DMYEGIYGHK PNIMVIHAGL
ECGLFKKPYP NMDMVSFGPT IKFPHSPDEK VKIDTVDLFW QQMVALLANI PVKA
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