| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1838 |
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| Symbol | lpxB |
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| ID | 5135775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1955238 |
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| End bp | 1956377 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533295 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001217762 |
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| Protein GI | 147673997 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.812439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAGAC CATTACGGAT TGGCATAGTT GTTGGGGAGC TCTCTGGCGA CACCTTAGGC
GAAGGCTTTA TCAAAGCGAT ACGTGCTCGT TACCCAGATG CTGAGTTTGT CGGCATCGGT
GGGCCGAAAA TGAACGCACT TGGCTGTCAA TCTCTGTTTG ATATGGAAGA GTTGGCCGTG
ATGGGTTTAG TGGAAGTGCT TGGCCGCTTG CCGCGCCTGC TGAAAGTCAA AGCCGAGCTG
GTTAAGTATT TCACTGCCAA TCCGCCGGAT GTTTTCGTGG GTATCGATGC GCCGGATTTT
AATTTACGCC TTGAGCTGAG CCTTAAACAA GCGGGGATCA AAACCGTACA TTACGTCAGT
CCATCAGTGT GGGCGTGGCG ACAAAACCGC ATTCATGGCA TTGCCGCGGC GACGCATTTA
GTGTTGGCCT TCCTTCCATT TGAGAAAGCG TTTTACGACA AATTCAATGT GCCTTGTGAG
TTTATCGGTC ATACCTTGGC GGATTCGATC CCGTTAGCGT CCGATAAGTT AGCCGCTCGC
CAACTGCTTG GTCTGGATGA GCAGCGCCGC TGGTTAGCCG TTTTGCCGGG CAGCCGTGGC
AGTGAAATGA AGATGCTCGC GGAGCCCTTT ATCGCCACCT GTCAAAAACT GCAGGCGCGC
TATCCAGATC TTGGCTTTGT GGTGGCCTTG GTGAATGCTA AACGTCGTGC GCAGTTTGAA
CAGGCTTGGC AACAAGTCGC TCCTGAGCTG AATTTTGTGC TGGTGGATGA TACCGCGCGC
AATGTGATTA CTGCAGCCGA TGCGGTGATG CTTGCCTCCG GCACGGTGGC CTTGGAGTGC
ATGCTGCTTA AACGCCCTAT GGTGGTCGGT TATCGCGTGA ATGCCTTTAC GGCCTTTTTG
GCCAAACGTC TGCTGAAAAC GCCGTATGTC TCTTTGCCGA ATATCTTGGC GGGAGAGGAA
CTGGTGAAAG AGCTGCTGCA AGATCATTGC ACCGTCGACA ACCTTTACCA TGAAGTGAGC
CGTTTACTCG AAAGCGACAA CCAAGCCTTG ATGGACAAAT TTACCGAAAT GCATCAATGG
ATCCGTAAAG ATGCGGATCA GCAAGCGGCG CAAGCTGTGC TGCATTTGAT TCAGAAATAA
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| Protein sequence | MNRPLRIGIV VGELSGDTLG EGFIKAIRAR YPDAEFVGIG GPKMNALGCQ SLFDMEELAV
MGLVEVLGRL PRLLKVKAEL VKYFTANPPD VFVGIDAPDF NLRLELSLKQ AGIKTVHYVS
PSVWAWRQNR IHGIAAATHL VLAFLPFEKA FYDKFNVPCE FIGHTLADSI PLASDKLAAR
QLLGLDEQRR WLAVLPGSRG SEMKMLAEPF IATCQKLQAR YPDLGFVVAL VNAKRRAQFE
QAWQQVAPEL NFVLVDDTAR NVITAADAVM LASGTVALEC MLLKRPMVVG YRVNAFTAFL
AKRLLKTPYV SLPNILAGEE LVKELLQDHC TVDNLYHEVS RLLESDNQAL MDKFTEMHQW
IRKDADQQAA QAVLHLIQK
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