Gene VC0395_A1818 details

Gene Information

• Locus tag: VC0395_A1818
• Symbol: upp
• ID: 5137547
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 1933092
• End bp: 1933718
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640533275
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_001217742
• Protein GI: 147675197
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATTG TTGAAGTTAA GCACCCTCTT GTAAAACACA AACTTGGCCT GATGCGTGAA 
GGCGATATCA GCACTAAGCG TTTTCGTGAG CTTGCAACTG AAGTGGCGAG TCTACTGACT 
TATGAAGCGA CTTCTGACTT TGAAACCGAA AAAGTCACGA TCGAAGGCTG GAATGGTCCT 
GTGCAAGTGG ATCAAATTAA AGGTAAGAAA GTGACGGTTG TGCCTATCTT GCGTGCAGGT 
CTTGGCATGA TGGATGGTGT ACTTGAGCAT ATCCCAAGTG CGCGTATCAG CGTGGTCGGG 
ATTTACCGTG ATGAAGAAAC TCTTGAACCG GTTCCTTACT TCAATAAGTT AGCCACTAAT 
ATTGAAGAGC GTATTGCCAT GGTGGTTGAC CCAATGCTGG CAACTGGCGG CTCGATGATT 
GCGACAATTG ACTTGTTGAA AGAGAAAGGC TGTAACCAGA TTAAAGTGCT GGTGTTGGTG 
GCTGCTCCGG AAGGGATTGC CGCTTTAGAA AAAGCGCACC CAGATGTTGA GCTTTACACG 
GCGGCGATTG ATGAGAAGCT GAACGACAAA GGCTACATCG TACCGGGTCT TGGTGATGCC 
GGTGATAAGA TTTTTGGTAC TAAGTAA 

 

Protein sequence

MKIVEVKHPL VKHKLGLMRE GDISTKRFRE LATEVASLLT YEATSDFETE KVTIEGWNGP 
VQVDQIKGKK VTVVPILRAG LGMMDGVLEH IPSARISVVG IYRDEETLEP VPYFNKLATN 
IEERIAMVVD PMLATGGSMI ATIDLLKEKG CNQIKVLVLV AAPEGIAALE KAHPDVELYT 
AAIDEKLNDK GYIVPGLGDA GDKIFGTK