Gene VC0395_A1699 details

Gene Information

• Locus tag: VC0395_A1699
• Symbol: aroC
• ID: 5136269
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 1825313
• End bp: 1826398
• Gene Length: 1086 bp
• Protein Length: 361 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640533156
• Product: chorismate synthase
• Protein accession: YP_001217638
• Protein GI: 147675123
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0082] Chorismate synthase
• TIGRFAM ID: [TIGR00033] chorismate synthase

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGGAA ACAGTATCGG ACAACATTTC CGAGTCACCA CATTCGGAGA AAGTCACGGT 
ATCGCACTGG GATGTATTGT CGATGGTTGC CCACCGGGGC TCACCATCAG CGAAGCGGAT 
TTACAAGTGG ATCTTGACCG TCGTCGCCCC GGCACATCGC GTTATACCAC CCAGCGTCGC 
GAGCCGGATG AAGTCAAAAT TCTCTCTGGT GTGTTTGAGG GCAAAACCAC AGGCACATCG 
ATTGGGCTAT TGATCGAAAA CACTGACCAA CGCTCTAAAG ATTATTCGGA TATTAAAGAC 
AAATTCCGTC CCGGACATGC GGACTACACC TATCATCAAA AGTACGGTGT GCGAGATTAC 
CGTGGCGGCG GCCGTTCATC GGCACGTGAA ACCGCCATGC GTGTTGCGGC GGGAGCGATT 
GCCAAAAAAT ACCTGCAGCA AGAGTTTGGC ATTGAAGTGC GTGCTTACTT GTCGCAAATG 
GGGGAGGTCG CGATTGATAA AGTGGATTGG AATGAGATTG AAAACAACGA TTTCTTCTGC 
CCTGATGTCG ATAAAGTGGC TGCGTTTGAC GAGCTGATCC GCGAGCTGAA AAAAGAAGGC 
GATTCGATCG GCGCCAAAAT CCAAGTGGTT GCTACTGGCG TTCCAGTTGG CTTGGGTGAG 
CCTGTGTTTG ATCGCTTAGA TGCGGATATT GCCCATGCCT TGATGAGCAT CAACGCCGTG 
AAAGGAGTCG AGATTGGTGA TGGCTTTGAT GTAGTGCGCC AAAAAGGCAG CCAACATCGT 
GACCCGCTCA CTCCACAAGG TTTCCGCTCT AACCATTCCG GTGGCATTTT AGGCGGTATC 
TCTAGCGGGC AAGATATTGT TGCTAATATT GCGTTGAAGC CAACGTCCAG CATTACCGTG 
CCGGGTGAAA CAATTGATGT TAACGGTGAG CCAACCGAGC TTATCACCAA AGGTCGTCAT 
GACCCTTGTG TGGGGATTCG CGCTGTACCG ATTGCAGAAG CCATGTTGGC GATTGTGCTG 
ATGGATCATC TGCTGCGTCA TCGTGGTCAG AACCAAGGTG TCGTAACGAC AACACCGAAA 
ATTTAG 

 

Protein sequence

MAGNSIGQHF RVTTFGESHG IALGCIVDGC PPGLTISEAD LQVDLDRRRP GTSRYTTQRR 
EPDEVKILSG VFEGKTTGTS IGLLIENTDQ RSKDYSDIKD KFRPGHADYT YHQKYGVRDY 
RGGGRSSARE TAMRVAAGAI AKKYLQQEFG IEVRAYLSQM GEVAIDKVDW NEIENNDFFC 
PDVDKVAAFD ELIRELKKEG DSIGAKIQVV ATGVPVGLGE PVFDRLDADI AHALMSINAV 
KGVEIGDGFD VVRQKGSQHR DPLTPQGFRS NHSGGILGGI SSGQDIVANI ALKPTSSITV 
PGETIDVNGE PTELITKGRH DPCVGIRAVP IAEAMLAIVL MDHLLRHRGQ NQGVVTTTPK 
I