| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1645 |
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| Symbol | ccmA |
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| ID | 5136122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1765753 |
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| End bp | 1766376 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533102 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_001217584 |
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| Protein GI | 147673545 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGAAG TTAAAAATCT CACCGCCATA CGTGATGAAC GGATTTTATT CGAATCACTC
TCTTTTGAGA TCCATGCTGG CGAACTCGTT CAAATCGAAG GTCGTAATGG CACAGGCAAA
ACGACCTTGT TACGTATTAT TGCGGGTCTT GGAGAGTGTG AGTGTGGGGA AATCCTCTGG
CAACGGAGCA AAATTCAAAG TGACCGCGAA AGTTATCATC AAGACTTGCT GTTTTTAGGT
CATCAAACCG GCATCAAGCG AGAACTCACC GCACTGGAAA ATTTACGTTT TTATCTGGCG
GTTCATCAAC AAACGGTGGA TGACCCCGCG ATTTTTGAAG CGCTAGCCAA AGTTGGTTTA
GCTGGGCGTG AAGATGTGCC GGTTGCACAG TTGTCGGCAG GGCAACAGCG TCGAGTTGCC
TTGGCAAGAT TATGGTTAAG TAAAAAGCCA CTGTGGATTT TGGATGAACC GCTCACCGCC
ATCGATAAGC AAGGAGTGAG TGTGCTTGAG GCGCTCTTTT TAAGCCATGC GCAGCAAGGG
GGGATAGTGA TACTGACGAC TCACCAAGAC ATGTTTGCCG ATAACCCTAA ACTGCGCAAA
ATTCGCTTGG GTGATCCGAA ATGA
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| Protein sequence | MLEVKNLTAI RDERILFESL SFEIHAGELV QIEGRNGTGK TTLLRIIAGL GECECGEILW
QRSKIQSDRE SYHQDLLFLG HQTGIKRELT ALENLRFYLA VHQQTVDDPA IFEALAKVGL
AGREDVPVAQ LSAGQQRRVA LARLWLSKKP LWILDEPLTA IDKQGVSVLE ALFLSHAQQG
GIVILTTHQD MFADNPKLRK IRLGDPK
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