| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1639 |
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| Symbol | dsbE |
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| ID | 5135937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1761053 |
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| End bp | 1761607 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640533096 |
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| Product | thiol:disulfide interchange protein DsbE |
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| Protein accession | YP_001217578 |
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| Protein GI | 147675010 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00868076 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATAAGA AGATTTTATT TATCCCGCTA GTGGCATTTT TGCTGTTGGC TGGTGTGTTT
GCTACCCAGT TAATGAAAAA CTCCGCAGGG GATGACCCAA CCAAGTTGGA ATCGGTTTTG
GTGGGAAAAA CCGTTCCTGA GTTTCGTCTC GAAGATCTGG CAGAGCCCGG TAAGTTATAC
GATCAGTCGA TTTTCAAAGG CGAGCCTTTA CTGCTTAATG TATGGGCAAC CTGGTGTCCA
ACTTGTTATG CCGAGCATCA ATATCTCAAT GAGTTGGCCA AACAAGGGGT AAAAATCATC
GGCCTTAATT ATAAAGATCA GCGAGATAAA GCAACTCAAT GGCTAAATGA TTTAGGCAAT
CCTTACCTGA TCAGCTTGTT TGATGGCAAT GGTATGTTGG GACTGGATCT TGGGGTGTAC
GGTGCTCCAG AAACCTTCTT AATCGATGCC AATGGCGTGA TTCGCTATCG TCATGTTGGG
GATGTTAATT CGCGCAACTG GCAAGAAACA CTCGCGCCAC TGTATGAAAA AATGCTGGCG
GAGGCGAAAC AATGA
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| Protein sequence | MNKKILFIPL VAFLLLAGVF ATQLMKNSAG DDPTKLESVL VGKTVPEFRL EDLAEPGKLY
DQSIFKGEPL LLNVWATWCP TCYAEHQYLN ELAKQGVKII GLNYKDQRDK ATQWLNDLGN
PYLISLFDGN GMLGLDLGVY GAPETFLIDA NGVIRYRHVG DVNSRNWQET LAPLYEKMLA
EAKQ
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