| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1638 |
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| Symbol | |
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| ID | 5136423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1760580 |
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| End bp | 1761056 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640533095 |
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| Product | cytochrome c-type biogenesis protein CcmH |
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| Protein accession | YP_001217577 |
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| Protein GI | 147675051 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00720006 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT GGTTGTTTGC GGTCTGTGCC GCCATGCTGA TTTCTCTCTC GGCGTTTGCA
ACGATTGAAG TGTATGACTT TGATACTCCA GAGCAGGAGA AACAATTTCA AGAATTGGGG
GCGACCTTGC GCTGCCCGAA ATGTCAAAAC AACACGATTG CCGACTCAAA CGCTGAGTTG
GCACAAGATC TGCGCCAAAA AGTGTATGAG ATGACCAAAG AGGGTAAATC GAAATCGGAA
ATCGTCGACT ACATGATTGC GCGTTATGGC AACTTTGTGA CCTACAATCC GCCATTTACC
TTAGGTACCG CTGTTCTTTG GCTTGGGCCT ATTTCAGTGT TAGTGATTGG TTTCACTGTG
ATTGTGTTAC GCAGTCGTCG TAAAGCGCGT GATGCTGCGA ATAATGCCGA GTGGAATGAA
GAGCAAGAAG CCCGTTTGAA AGCATTGCTA AAAGAAGAGC AAGAGGGAGA GAAGTAA
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| Protein sequence | MKKWLFAVCA AMLISLSAFA TIEVYDFDTP EQEKQFQELG ATLRCPKCQN NTIADSNAEL
AQDLRQKVYE MTKEGKSKSE IVDYMIARYG NFVTYNPPFT LGTAVLWLGP ISVLVIGFTV
IVLRSRRKAR DAANNAEWNE EQEARLKALL KEEQEGEK
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