| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1537 |
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| Symbol | pvcA |
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| ID | 5136158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1651526 |
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| End bp | 1653352 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640532994 |
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| Product | pvcA protein |
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| Protein accession | YP_001217478 |
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| Protein GI | 147675647 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3207] Pyoverdine/dityrosine biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGATG CTCAACAAGA AACCTATGTG GAGAAGATCT CATTTATTCT TCTAAATCAA
CTAATTGCAC AATGCAATGC CAGTTACAAC GGGCTTGCTC ACTTAAAAAG TCAAATTCGT
AGATTTGTAA ATAGCCAAGA GAAAATTAAA TTACTCCTCC CCGCTTTCCC CTGTAAAACA
AATAACTTAG ATAAAGTACT TAGCCATACA CCCGATCTCG GTGAATATGT CGTTTTAAGA
AAGTTTGTTC AATGCATCCG TGACATTGAA TCCGTTTATG AACCGGGTGT GACGTTTTAT
ATCTTTTCTG ACTATCATAC ATTCTCTGAT TATATCTCTG TCGACTTAGA CCACCATTAT
GATTACTCAG ACAATCTGCG TAAAATGGTA GCAAACATGA ATTGCAGCGA TGCGTTAAAA
ATTGTCAATT TCGAACATTT TGATGAATTT TCCGATCTGA AAGACACGGA ATATTTTGAT
GGATTACGTG AGAAGTTTGG TGATCCTGAC TATGCAGAGA ATTTCACTGA ACTTAAATTA
AAAAATAATA AGATGAATCA AACCTATCTG GGTTTGAAAA AATTCATGAA TCAGGATCAG
AAATTCGTTC TTGCTCCTCT CTCATACAAA GATCGCCGAC GTCGCCTTGC GGATATCGCT
AAGGGGATGA TGGTGCAAGG CAAAGCGCTG GATAACTTCT TGCAGCAAAA ATTTGCCGAT
TGCATTCGAT TAAGCATTCA TGAACATCCG ATGATAGGTA AGAAATACTC GCTGTTTCTG
TTCCATGAAC GCCAATTCAA AACGCCTTGG CACAGTACTT TGCTGTTTGA TGCCAGCCGC
GGCGAATTCA TTATTGATAG TAAAGAAAAT CACTTAAAAC GTTCTGGGGT GATCTTGCCT
GTCACTCATG ATGGTAAGCC TTGGTGTTAC CTGCAATTGA GCGCAGCCGA TGAAGTGCAC
GCCCATGCGC TGCGCCAAAT ACGGGCAGAA TTACAACATG AAAAATCGGG GTTGTATTTA
GAGTGCCCAG CCAATCGCGC TTCACTGGAT ATGCTACTTC CCAAAGAGCT CAGCCAACTG
GTCAAAGAAT TTGGCTCGGT TTTGCTGCGC GGTTTTGCAC CACTGGCTGA CGCTGAACAG
CTACAAACTT GGTACCTCAA TCACCGTTCT GCTGTCACTT GGGCTTATGA GGTTAGCGTA
CAAGCCTTCA AAGGCAGTGC TGGTGAGCAA CCTTTACATT GGGAGCTCTC CTGCCCACCC
GCTTATATGG CCGTACACCC ACATCGCTAT CAATATGAAG ATTACACCCC CCATGAGTAC
GCCGTTTACA GCGTTGCATC ACCAGACTCG AATACTTGGA CCGTGGTTGA CGCTGCACTC
GCCGTCCTGA CCATCAACGG TCAAGAGCGC GAACAGCTGC GTAACACCAT CATGCACTAC
AGCAACTTTT CACCTGAACA TGGCGGGAAT ACTTTACACC CCCTCGTCCG TTACTGTTCG
ACATCACGCC AAGATGTGCT GCGTTGGCAA GATTTTCAGC ATGCGCAGGG CTACCTCACT
CATTTAGAAG GGGTCAGCGA ATTAACCGAG CAGTCGCGGG TCTATCAACG CCTCAACACG
TTATGTCATG ACCCAAGAGT TTGCTTTGAG TACAGGCTAC AAACTGGCGA TTTGCTGTTG
GTGAATAATT TAACCACCTT GCAAGCGAGC CATACGAGTT CGATGCATAA CGAATACTGG
TCTATTCATC TACAACCAGA CTCAATCAAC TCACCTTGGC AGCCGCACAA TCGTATTGTT
GAACAAGCTG AACTCACCTC GGCTTAG
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| Protein sequence | MLDAQQETYV EKISFILLNQ LIAQCNASYN GLAHLKSQIR RFVNSQEKIK LLLPAFPCKT
NNLDKVLSHT PDLGEYVVLR KFVQCIRDIE SVYEPGVTFY IFSDYHTFSD YISVDLDHHY
DYSDNLRKMV ANMNCSDALK IVNFEHFDEF SDLKDTEYFD GLREKFGDPD YAENFTELKL
KNNKMNQTYL GLKKFMNQDQ KFVLAPLSYK DRRRRLADIA KGMMVQGKAL DNFLQQKFAD
CIRLSIHEHP MIGKKYSLFL FHERQFKTPW HSTLLFDASR GEFIIDSKEN HLKRSGVILP
VTHDGKPWCY LQLSAADEVH AHALRQIRAE LQHEKSGLYL ECPANRASLD MLLPKELSQL
VKEFGSVLLR GFAPLADAEQ LQTWYLNHRS AVTWAYEVSV QAFKGSAGEQ PLHWELSCPP
AYMAVHPHRY QYEDYTPHEY AVYSVASPDS NTWTVVDAAL AVLTINGQER EQLRNTIMHY
SNFSPEHGGN TLHPLVRYCS TSRQDVLRWQ DFQHAQGYLT HLEGVSELTE QSRVYQRLNT
LCHDPRVCFE YRLQTGDLLL VNNLTTLQAS HTSSMHNEYW SIHLQPDSIN SPWQPHNRIV
EQAELTSA
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