Gene VC0395_A1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1524 
Symbol 
ID5135858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1639939 
End bp1640697 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content50% 
IMG OID640532982 
Producthypothetical protein 
Protein accessionYP_001217467 
Protein GI147674331 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGATTG GTGGTACCAC ATCGCCTATT GCTAGCCACT CTTTCTATGT GGCAACAAGA 
GGTTATATGG ACAAGACACA ATCTGAAGAG AAAAATCGCC GCCCACTTGC GGTCAGAGAT
CTGAACTTCA CCAAACGTAT CGCCGTTTGG TTGAGCCAAA AGCAGATCAC CCCTAACCAA
ATTTCACTCA TGAGTATTGC CTTTGCGCTG CTTGGCTGTG CCATTTTGGC CGTATATCAC
TACTATCCTG CCCCGCTTTG GCTCATTCTG GCGGCCTTAT CGATTCAAGC GCGTTTACTG
TGTAACTTGT TTGATGGCAT GGTTGCCGTA GAAGGCGGCA AGAAGACCCC TGCTGGCGAA
TTGTTTAATG ATGTACCGGA TCGGATCGCC GACCCTTTGT TGATTCTTGG TGCAGGTTTT
GTCACGACTT CTGCGCTGGG AATGACCTTG GCATGGCTTT GTGCGCTTCT TGCGGTGCTG
ACCGCCTATA TTCGTGTATT GGGAGTCAGC ATAGGCGGTG AAGCTGATTT TCAAGGCCCG
ATGGCTAAAC AGCATCGCAT GGCGCTGCTT ACCCTCAGTT TGCTCTTTAT CGCGGCACTT
TCACTGTTCG ATGAGCTCCC AACCTTTTTC GCATACACCA TGGATCTCAC CTTAATCGTC
ATGCTGATTG GGCTGGTACT CACGGTTTGG CGACGCTTAC AGCACATTTA TCAATTCCAT
GCGGCGCGTG CATCCTCGTC CGATCATCAA GGTAACTAG
 
Protein sequence
MRIGGTTSPI ASHSFYVATR GYMDKTQSEE KNRRPLAVRD LNFTKRIAVW LSQKQITPNQ 
ISLMSIAFAL LGCAILAVYH YYPAPLWLIL AALSIQARLL CNLFDGMVAV EGGKKTPAGE
LFNDVPDRIA DPLLILGAGF VTTSALGMTL AWLCALLAVL TAYIRVLGVS IGGEADFQGP
MAKQHRMALL TLSLLFIAAL SLFDELPTFF AYTMDLTLIV MLIGLVLTVW RRLQHIYQFH
AARASSSDHQ GN