Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1524 |
Symbol | |
ID | 5135858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1639939 |
End bp | 1640697 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640532982 |
Product | hypothetical protein |
Protein accession | YP_001217467 |
Protein GI | 147674331 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGGATTG GTGGTACCAC ATCGCCTATT GCTAGCCACT CTTTCTATGT GGCAACAAGA GGTTATATGG ACAAGACACA ATCTGAAGAG AAAAATCGCC GCCCACTTGC GGTCAGAGAT CTGAACTTCA CCAAACGTAT CGCCGTTTGG TTGAGCCAAA AGCAGATCAC CCCTAACCAA ATTTCACTCA TGAGTATTGC CTTTGCGCTG CTTGGCTGTG CCATTTTGGC CGTATATCAC TACTATCCTG CCCCGCTTTG GCTCATTCTG GCGGCCTTAT CGATTCAAGC GCGTTTACTG TGTAACTTGT TTGATGGCAT GGTTGCCGTA GAAGGCGGCA AGAAGACCCC TGCTGGCGAA TTGTTTAATG ATGTACCGGA TCGGATCGCC GACCCTTTGT TGATTCTTGG TGCAGGTTTT GTCACGACTT CTGCGCTGGG AATGACCTTG GCATGGCTTT GTGCGCTTCT TGCGGTGCTG ACCGCCTATA TTCGTGTATT GGGAGTCAGC ATAGGCGGTG AAGCTGATTT TCAAGGCCCG ATGGCTAAAC AGCATCGCAT GGCGCTGCTT ACCCTCAGTT TGCTCTTTAT CGCGGCACTT TCACTGTTCG ATGAGCTCCC AACCTTTTTC GCATACACCA TGGATCTCAC CTTAATCGTC ATGCTGATTG GGCTGGTACT CACGGTTTGG CGACGCTTAC AGCACATTTA TCAATTCCAT GCGGCGCGTG CATCCTCGTC CGATCATCAA GGTAACTAG
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Protein sequence | MRIGGTTSPI ASHSFYVATR GYMDKTQSEE KNRRPLAVRD LNFTKRIAVW LSQKQITPNQ ISLMSIAFAL LGCAILAVYH YYPAPLWLIL AALSIQARLL CNLFDGMVAV EGGKKTPAGE LFNDVPDRIA DPLLILGAGF VTTSALGMTL AWLCALLAVL TAYIRVLGVS IGGEADFQGP MAKQHRMALL TLSLLFIAAL SLFDELPTFF AYTMDLTLIV MLIGLVLTVW RRLQHIYQFH AARASSSDHQ GN
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