Gene VC0395_A1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1444 
Symbol 
ID5136271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp1545037 
End bp1545711 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content37% 
IMG OID640532902 
Producthypothetical protein 
Protein accessionYP_001217387 
Protein GI147673972 
COG category[S] Function unknown 
COG ID[COG3110] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000000075829 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTA ACCCACTGAT TTTAGGTCTT CTGTTGTCAT TTTCAGCAGG TCACTCATTA 
GCCGATGTAG TATTAAAAGT GCCAGAAAAT ATTGATTTAC TTTCTGTAAA TATGCAAAAA 
CCAAAATCTG AAGGCGGATT ATTTGGTGAT AAAACGATTA TGCTTAAAGA TGGCACGAAC 
CAGATTGTGT TTCGTTATAT TCCTACTTTC GATGATGGTG ACGATGTTAA GAAGGTATAT 
AGCGATACAA TTATTGCAAA ATTTGAGAGT GAAAATGCCA CTCTTCACTT TAAGATTCCT 
AGTTATCGCA ATATAAAAGA AGCAAATGAG AAAATTCAAA CAATGGAGTG GCAACTTGTT 
GACGAAAAAG GGCAATCTGT CGCTCTAGTA GAAGACAAAC TACTCAATCC AGGTGTTCAA 
TGGGGCAGAA ATTACAGCCA AGAAGCTACA GAATATAACC AAAATGGAGG GGTTGCTGCG 
ATCGGATACC TGAAAGTAGT TACTAATGAG GCTCAGCTAT CTGAAAATAC GACACAAGTT 
ATTATGAGCG AAGCTTCTCA ACCATTAGAA GTAGTCGGAT CATCAAATAA CCTGACTCAA 
CTTCAACTTT GGTATAGCAA AGCCTCAAAA GAAGAACGCA AAGCGTTTAA GAAATGGATG 
GTCGATCAAG AATAA
 
Protein sequence
MKLNPLILGL LLSFSAGHSL ADVVLKVPEN IDLLSVNMQK PKSEGGLFGD KTIMLKDGTN 
QIVFRYIPTF DDGDDVKKVY SDTIIAKFES ENATLHFKIP SYRNIKEANE KIQTMEWQLV 
DEKGQSVALV EDKLLNPGVQ WGRNYSQEAT EYNQNGGVAA IGYLKVVTNE AQLSENTTQV 
IMSEASQPLE VVGSSNNLTQ LQLWYSKASK EERKAFKKWM VDQE