| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1417 |
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| Symbol | frwABC |
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| ID | 5137181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1516131 |
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| End bp | 1517996 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532875 |
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| Product | PTS system, fructose-specific IIABC component |
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| Protein accession | YP_001217360 |
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| Protein GI | 147673546 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB
[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR00848] PTS system, fructose subfamily, IIA component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATATTA CCCATCTGAT CGAACCTGAA ATCATCTGTT TAGATCTAAA AGCCAATAAC
AAAGAAGATG TTCTGATTGA GCTGGTTGAG TTGCTCGATA ACGCAGGAAA GTTGACCGAT
AAGCAGCAAT TTTTAAACGA CATTTGGCGA CGAGAAGAGA TCGGAAATAC AGGGTTTGAA
GAAGGAATAG CCATTCCACA CGCCAAAAGT GCTGCGGTGG CGTTGCCTGC AGTCGTCGTG
GGTATTAGCC GCCAAGGGAT CGATTACGGT GCAGAAGATG GTCAGCTTTC TGATGTGTTT
TTTATGCTGG CATCACCGGA TGGAGAAGAT CATCACCACA TTGAAGTATT GGCACAAATC
TCCAGTAAAT TGATTGAAGA GGGATTTGTT GAACAGCTCA AAGCCGCAGA AAGTGTTGAG
CAGGCACTCG CCCTTTTTAT TCACCCACAG CACTCAACAT TAAGCTCTAC ACAGGTAATG
GATTATGCCG ATTACCAGCC GCTAAGCCCA ATGGCACAAA GATTAGCTCG CGTTAAAGAG
CATCTATTAT TTGGTACCTC TCACATGATG CCGTTTATCG TGGCGGGTGG GGTATTACTC
TCGCTTTCAG TGATGATGTC TGGTCACGGA GCGGTGCCAG AAGAGGGCGT GTTGGCGGAT
ATCGCTCAAA TGGGTATTGC CGGTTTAACC CTATTTACGG TGGTATTGGG TGGTTATATC
GCTTACTCGA TGGCAGATAA ACCCGGTTTG GCCCCCGGCA TGATTGGCAC CTGGATTGCG
ATAAACCAAT ATCAAACCGG CTTTATTGGC GCGATCATCG TGGGTTTTTT TGCAGGCTTT
GTGGTTCGTC AGCTGAAAAG AATCGCTCTC CCCGACAGCA TGAGTTCGCT GGGTTCCATC
TTCATCTATC CGCTGGTGGG GACGTTTGTA ACCTGTGGTG CTGTGATGTG GTTAATCGGT
GCACCGATTG CCAGCAGTAT GCTGTGGCTC AATCAATTTT TGGCATCGAT GGCCGATTCC
GGCAAAGTGG TGCTCGGAGC GGTATTGGGG GCGATGACTG CCTTTGACAT GGGCGGCCCA
ATCAATAAAG TCGCCACGCT GTTTGCCCAA ACTCAAGTCA ACACCCAACC TTGGCTAATG
GGTGGGGTGG GGATTGCCAT TTGTACCCCA CCATTGGGGA TGGCGCTTGC GACCTTATTG
TCACCAAGTA AATTCAAACG GGATGAACGT GAAGCCGGAA AAGCGGCAGG CATCATGGGT
ATGATTGGCA TTAGTGAAGG GGCGATTCCG TTTGCCGCCG CTGATCCCGC GCGCGTACTC
CCTGCAATTA TTGCGGGTGG TATTGTTGGC AACGTGATTG GTTTTCTCTT TCAAGTGCTC
AATCATGCCC CTTGGGGCGG TTGGATTGTG CTGCCCGTTG TGGACGGCAA GTTAGGGTAT
ATTCTTGGCA CTATCGCCGG TGCATTAGCC ACGGCACTGA TTGCTATTGC CCTGAAGAAA
ACGGTGCATG AGCAGGACAA TGAGCAGGGG CAGTCACTTG CTTTTTCATC GGTTATTGGA
GAAGGGCAAG CCGACATTCT TGCCGTCACC TCGTGCCCTT CTGGCGTTGC TCATACGTTT
TTAGCGGCTA AATCACTTGA AAAAGCCGCC TGTCTGGCGG GAGTGAAAAT CAAAGTAGAA
ACACAAGGCG CCAACGGTAT CATCAATCGA ATCACGGCCA AAGATGTGCA ACGAGCGAAG
CTGGTGATCT TTGCGCACGA TGTGGCGATT AAAGAACCAG AACGCTTCAA GCACATTAAA
GTCATTGACG TGACAACGAA AGACGCGATT TTAAATGCCG CGGCATTGGT GCAGATAAAG
CGATAA
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| Protein sequence | MDITHLIEPE IICLDLKANN KEDVLIELVE LLDNAGKLTD KQQFLNDIWR REEIGNTGFE
EGIAIPHAKS AAVALPAVVV GISRQGIDYG AEDGQLSDVF FMLASPDGED HHHIEVLAQI
SSKLIEEGFV EQLKAAESVE QALALFIHPQ HSTLSSTQVM DYADYQPLSP MAQRLARVKE
HLLFGTSHMM PFIVAGGVLL SLSVMMSGHG AVPEEGVLAD IAQMGIAGLT LFTVVLGGYI
AYSMADKPGL APGMIGTWIA INQYQTGFIG AIIVGFFAGF VVRQLKRIAL PDSMSSLGSI
FIYPLVGTFV TCGAVMWLIG APIASSMLWL NQFLASMADS GKVVLGAVLG AMTAFDMGGP
INKVATLFAQ TQVNTQPWLM GGVGIAICTP PLGMALATLL SPSKFKRDER EAGKAAGIMG
MIGISEGAIP FAAADPARVL PAIIAGGIVG NVIGFLFQVL NHAPWGGWIV LPVVDGKLGY
ILGTIAGALA TALIAIALKK TVHEQDNEQG QSLAFSSVIG EGQADILAVT SCPSGVAHTF
LAAKSLEKAA CLAGVKIKVE TQGANGIINR ITAKDVQRAK LVIFAHDVAI KEPERFKHIK
VIDVTTKDAI LNAAALVQIK R
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