Gene VC0395_A1415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1415 
SymbolfrvA 
ID5136997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp1514201 
End bp1514641 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content37% 
IMG OID640532873 
ProductPTS system, fructose-specific IIA component 
Protein accessionYP_001217358 
Protein GI147674475 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR00848] PTS system, fructose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACCG AGCTCACCAA CATCCATTTA ATTAAAGGCA ATCTTCAAGC AAATAGTAAA 
AATGAAGTTT TTGCAGAATT GGCGCAAATG TTACTTGAGA ATAACCGCAT CAGTAACAAA 
GAGGATTTTT TAAACGACAT TGAAATACGT GAAAGATTAA GTGTCACGTC AATGGACGGC 
ATCGCCTACC CACACTCAAA AAGTAAAGCC GTTACAAAAC CTGCCATCGC TGTTGGTGTA 
AAGCACGAAG GCATTGAATA TGGAGATGAA GAAGGCATCA AACCGACCGT ATTCTTCATG 
ATTGCCTCTC CCGACAACGG CGCAGACCAC CATATTTATG TTCTTCAAGA ATTATTCGGA 
AAATTTAGCG AAGAATTTAT TGAAGATATT CATAACGCAA AAAATGAACA TCAGATCCTT 
AATATTTCAA TTCAATCATA A
 
Protein sequence
MITELTNIHL IKGNLQANSK NEVFAELAQM LLENNRISNK EDFLNDIEIR ERLSVTSMDG 
IAYPHSKSKA VTKPAIAVGV KHEGIEYGDE EGIKPTVFFM IASPDNGADH HIYVLQELFG 
KFSEEFIEDI HNAKNEHQIL NISIQS