Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1378 |
Symbol | |
ID | 5136872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1483276 |
End bp | 1483998 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640532836 |
Product | N-acetylmannosamine-6-phosphate 2-epimerase |
Protein accession | YP_001217321 |
Protein GI | 147674046 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3010] Putative N-acetylmannosamine-6-phosphate epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCCCG TCGTGAGAAA GAATTTTTTG AATATCGAAG AGTTAAAGCG ATTTTTAAAC GGCCAAACTG TCGTTTCCAT ACAACCTGTA ACAGGCAGCC CACTCGATAA AACAGATTTC ATTGTGGCGA TGGCGATCGC CGTCGAACAA GCGGGTGCAA AAGCGCTGCG CATTGAAGGT GTGAATAACG TGGCTGCTGT ATCCGCCGCA GTAACAATTC CGATTATAGG TATCGTTAAG CGTGACTTGC CTGATAGCCC AATTCGAATC ACTCCTTTTG TTTCAGATGT TGATGGCTTA GCAAATGCTG GCGCAACGGT CATTGCTTTT GATGCCACCG ATAGAACACG CCCTGAAAGT CGAGAACGTA TTGCGCAAGC AATCAAAAAC ACGGGATGTT TTGCGATGGC CGATTGCTCC ACATTCGAGG ATGGATTATG GGCTAACTCA CAAGGTGTTG AAATTGTTGG ATCAACACTG TCAGGCTATG TCGGAGATAT TGAGCCCACG GTTCCAGATT TCCAACTTGT GAAAGCGTTT TCTGAAGCCG GCTTTTTTAC CATGGCGGAA GGTCGATACA ATACGCCTGA GTTAGCAGCG AAAGCTATTG AGTCTGGTGC GGTTGCCGTA ACGGTTGGTT CTGCATTGAC TCGATTAGAA GTGGTTACTC AATGGTTCAA TAACGCAACC CAAGTTGCGG GAGAAAGGAA ATGCGCACAC TAG
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Protein sequence | MRPVVRKNFL NIEELKRFLN GQTVVSIQPV TGSPLDKTDF IVAMAIAVEQ AGAKALRIEG VNNVAAVSAA VTIPIIGIVK RDLPDSPIRI TPFVSDVDGL ANAGATVIAF DATDRTRPES RERIAQAIKN TGCFAMADCS TFEDGLWANS QGVEIVGSTL SGYVGDIEPT VPDFQLVKAF SEAGFFTMAE GRYNTPELAA KAIESGAVAV TVGSALTRLE VVTQWFNNAT QVAGERKCAH
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