| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1359 |
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| Symbol | |
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| ID | 5137318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1451122 |
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| End bp | 1454562 |
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| Gene Length | 3441 bp |
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| Protein Length | 1146 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640532817 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217302 |
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| Protein GI | 147675032 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGTTAA CCTCTTTAAT CAGCAAGTTC TTCTCTAGCT CAGATAAAAC GTCTCAGTTT
GAACTCATTT GTGATGATAG TCTTGATTTT GCAACTTCCA GAAAAACTCT AGAGAAAATT
AAAGCTGATG AGTGGATAAC AGCGCAGTAT GTTGCACTTA AAATGCTTGA AGAGCAGGGG
GATGTAAGCT CATTTCCAGA TGGCTTCATT ATGCCTGCCG ATACAGCTGT CAGACTCGAT
TCTGAGTTGA GGGATTTGTT TAGTTTGCCC CCGGTTTGGA AAGGAGTCAT TGACGCTGAT
ATTCAAGGAA AAGCTAGTAC ACCCACCTTT AAAATTGATC TTTCGGTCAC AACCAAACAA
GGTCGAACAA CACTAAATTA CACTGTGGAT GGGCCTTTCA TTCGGTTTAG TCAAAATGAG
CAGTACCTGC TAACACCCGA GCAGCTTATG GTATTTATTG CGCATAAAAC CCATGTAAGG
TCTGATAGGT CTGAATATGA TAACTTACTG TACTTACACT CTTTGCAAGA GGCCCAAAAG
AATGGTTGTA AGCTGAATCT AAAGCACTTT GAAAGGCTAA GAATATTGAC ACCAAATAAA
ATCACAGTAG AAGCAGAATT GAATTCTCAA GGCGAGCTAA TATTGACGCC AAACATGGGG
CAAAGTGCGA GTCATGAGTC GATTCAAAAG GTTTTGGGGC AGTTGCAAAG CGACAACGCA
GTTACTCTGA AAGTGGGTGA TGAAATAGTC TTATTTTCTG AAGAAAAGCT AATGGCTGTA
AAAGAAGTTA TTAGCAACAG GGTAATTCCC CAACAGCAAG TTAAAGCGTT CCTGGAAAAC
CCTACAGCAT ATATTGATGC GAGTTTAGTC GATCTTGATT TAGGTTTTTC TATCAGAGTT
CATGGTGCGA CAGTTTTTAA ACATGCTTAT TTTGGAGAAA CGGACGAGTC AGGTATAGAT
TGGTTCGGAG CCTCCCCCAC ATCTGATTTG ATTAATCCAA TATCCAAGCT GACTGATAGA
GTTCGCGATA AAACAACTCT TGAGGACGTA GCTAAGAAGA TTGAAGATGC ACGACAAACC
GGAGCAACCG TTTTTGATTA TGAAGGACAA TCATACGATA TCAGCGATCC TGCAGCTGTT
GAAAAAGTTC TAAACGAAAT AGGTCACAAG ATATCTAGCC CTAATACAGA TCTTTCTAGC
TACGGAGAGG CAGAAGACGC CGAGACTGAA TCAGAAGGCT CAGAAATACA TGTTGTTGAT
ATTGATCTAA ATGACGAAGA GCTGTCTGAA AATTCTCCTA AAGTTGAACA ACTGATTTCT
GATATTTCAT GGGATGGTGA GTTAAATTGG GAAAACCACA AGCGGACACC ATTCCCACAC
CAGGATATTG GTGTTCGTTG GATTTTAGGC GTTGAACAAA AAAGCTTATC AGACTCGAAA
GTTAGTGGAG CCTTGCTAGC TGATGACATG GGGTTAGGTA AGACTTTTAT GGCCCTCTCA
GCAATAGAAC ATATTTATCA ACGACAACAA ATTAGTGGTG AAACGAAGAA ACCTGCGTTG
ATAGTTGCTC CTTTGAGTTT ATTGGAAAAC TGGAAGGATG AGGTAGATAA AACCTTTAAA
CACTCACCAT TCAAAGATGT AGTTATTTTG CAATCATCCG CTGAGTTAAA TGAGTATCGC
ATGGGGGGCG TAGAGATTCG AGGCCAGAGC GCATCTGATG ATTGTTTAGA ACCCAAATAT
TCTTTGAAAG TTGGGAAATA CTTTGGTCCT AGCCGTTTAG ATCTACCAGA GCGATTGGTA
ATCACTACTT ATCAAACTTT GCGCGATTAC CAGTTCTCCA TGTGTTTGAT TGATTGGGGG
ATCGTGGTTT TCGATGAAGC CCAGAACATT AAAAATCCAA ATGCACTTCA AACTCGTGCT
GCGAAAGGCC TAAAAGCGGA TTTCAAACTA GTGGCTACGG GTACGCCTGT AGAAAACAGC
TTAGCCGATT TTTGGTGTTT AATGGATACA GCTTGCCCAG GACATCTGGG TAGCTATCAA
GAATTTCGTG CTCGTTATAT CTCACCAATT CTTAAAGCTG CTGGTGATGA AGTTGAAGAA
ATAAGAGCTA GGCTTGGAAG AGAACTTCGT ATAGCTGTCG GGGCATTGAT GCTTAGGCGC
ATTAAAGAGG ACAACCTTAA AGGGTTACCT CTAAAACATA TGTATGCTGG TGGAGAATTT
GAAAACTGGA AGTATTTAGA AGAACTTAAG TCGACAATGG TTGGCTACCA GAGAGATGTT
TACGAAGGAG CGATTAGCCA TCAACTCGAG AATGAAGAAA GTCACGCGCT TACCACTTTG
ATGCGGCTAA GAGATAGTTC GTTACATCCT CGGTTAAGTG ATGGAGGTCG CCTTGATATT
CCCAAAAATG CAAAATCAGC TAGAGCTCTA TACGGAGAAT CAGGAAAATT AGTTTCCTTG
CTTGAGACTT TAGACAGAGT ACGAAGCAAA CAAGAAAAGT GCATTATTTT TGCGGTTAAC
AAACGACTGC AAAGTTTCTT AAGTGTGACT TTGGGGCAGA TCTATAACCT AGGTCCGCTC
TCAGTTATTA ATGGTGATGC AAAAGCCGTA GCAAAGCGTA AATCTGTCCC AACTCGAAAA
TCAATGATTT CAGACTTCGA AGCAAAAGAA GGCTTTAATC TAATTGTAAT GTCTCCAGTC
GCGGCTGGTG TCGGTTTAAC TGTGGTCGGT GCGAATCATG TGGTTCATTT AGAGCGGTAC
TGGAACCCAG CTAAAGAAGC TCAAGCTACG GATAGGGTTT ATCGTATCGG ACAGGAAAAA
GAGGTTCATA TCTACATCCC TCTGTTGCAT CACCCTGAAT TTGAATCATT TGATGTAAAC
CTACATAGGC TACTTACCCA AAAAACGTTG CTGAAGGATG CTGTTGTTAC ACCAGAAGAT
GTTATTCCAC AGCCAGCAGG TGTCGGGGGA GTAGTTTCTG GTGATTTGAT TGATAAACGT
ATTACAGCGG CTGAACTTGA TAAGTTAAGT TGGCAGCAAT TTGAAGCGTT ATGTGTAGAA
TTGCTTGCAA AGATTACGGA TAGTGAAAGC GCTTGGTTGA CGAACAATGG TGCTGATCAT
GGTGCTGATG GTGTACTACT TAATAACAGT GGTAATATTT TGCTTCAGGC TAAGTTTACG
CAACGACAAT ATGATGGTTA TAAAGGGATA CAGGAGATTC ATTCTGCTAA ACCTATTTAT
GAATCAGCAA TGAGAAGTTC TTTTGGGCGT TTGATTTTTG TTACTAATTC ACCTTTGTTA
GCTAAGCGAA CTCATGAAAT TGCTGCCACA TGTGGTATTG AAGTTTTGGG CAGAACACAG
CTGTTAACTT ACCTTGAAGA ATATGACATT ACACTGAAAG ACATTCTGTC AAGGTTGGGG
AAAGATCGAT TAAGAGTTTA A
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| Protein sequence | MELTSLISKF FSSSDKTSQF ELICDDSLDF ATSRKTLEKI KADEWITAQY VALKMLEEQG
DVSSFPDGFI MPADTAVRLD SELRDLFSLP PVWKGVIDAD IQGKASTPTF KIDLSVTTKQ
GRTTLNYTVD GPFIRFSQNE QYLLTPEQLM VFIAHKTHVR SDRSEYDNLL YLHSLQEAQK
NGCKLNLKHF ERLRILTPNK ITVEAELNSQ GELILTPNMG QSASHESIQK VLGQLQSDNA
VTLKVGDEIV LFSEEKLMAV KEVISNRVIP QQQVKAFLEN PTAYIDASLV DLDLGFSIRV
HGATVFKHAY FGETDESGID WFGASPTSDL INPISKLTDR VRDKTTLEDV AKKIEDARQT
GATVFDYEGQ SYDISDPAAV EKVLNEIGHK ISSPNTDLSS YGEAEDAETE SEGSEIHVVD
IDLNDEELSE NSPKVEQLIS DISWDGELNW ENHKRTPFPH QDIGVRWILG VEQKSLSDSK
VSGALLADDM GLGKTFMALS AIEHIYQRQQ ISGETKKPAL IVAPLSLLEN WKDEVDKTFK
HSPFKDVVIL QSSAELNEYR MGGVEIRGQS ASDDCLEPKY SLKVGKYFGP SRLDLPERLV
ITTYQTLRDY QFSMCLIDWG IVVFDEAQNI KNPNALQTRA AKGLKADFKL VATGTPVENS
LADFWCLMDT ACPGHLGSYQ EFRARYISPI LKAAGDEVEE IRARLGRELR IAVGALMLRR
IKEDNLKGLP LKHMYAGGEF ENWKYLEELK STMVGYQRDV YEGAISHQLE NEESHALTTL
MRLRDSSLHP RLSDGGRLDI PKNAKSARAL YGESGKLVSL LETLDRVRSK QEKCIIFAVN
KRLQSFLSVT LGQIYNLGPL SVINGDAKAV AKRKSVPTRK SMISDFEAKE GFNLIVMSPV
AAGVGLTVVG ANHVVHLERY WNPAKEAQAT DRVYRIGQEK EVHIYIPLLH HPEFESFDVN
LHRLLTQKTL LKDAVVTPED VIPQPAGVGG VVSGDLIDKR ITAAELDKLS WQQFEALCVE
LLAKITDSES AWLTNNGADH GADGVLLNNS GNILLQAKFT QRQYDGYKGI QEIHSAKPIY
ESAMRSSFGR LIFVTNSPLL AKRTHEIAAT CGIEVLGRTQ LLTYLEEYDI TLKDILSRLG
KDRLRV
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