Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1301 |
Symbol | |
ID | 5135401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1383949 |
End bp | 1384779 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640532759 |
Product | hypothetical protein |
Protein accession | YP_001217245 |
Protein GI | 147675295 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.47539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAG TTGTCGTGAT AGGTGCAGGA TGGCTAGGTT TGCCACTGGC ACAATGGCTT AAGCAACAAG GCCATATTGT GTATGCGACA CGCACTACCC CACAGGCTGT TCAAACTCTT GAAGATCAAG GTATTGAGAG TTTTGTTTGC CAATTAGACC AACCCGATGG CTTAAGCGAT GCTTTGCTTG AGCGGCAATG CGATACCGTC ATTGGCTGCT TTCCTCCCGG TTTTCGTCAA GGCGCTGGCG AGCACTATGC CAAACATTGG CAAAACTTGG TGCAGCATGC CAAACAGGCC AATATTCAAA AACTGGTGAT GATCAGTTCA ACCTCTGTGT ATCCCGATAT CGCCAAAACG ATGAATGAAC AAGACGCCTC TTTGGCATTG GCACTGGATA ATTCCGCTTT TGATGCGAAA GCGCGCATCT TACTCAAAGC CGAACAGTAT GTGATCACCT CAGGTATGGA TTACACCATT CTGCGTTGCA GTGGCCTGAT GGGGCCTAAA CGCCACCCAT CACGCTTTGT CAGCAAAATG GCACAAGTCA GCCGACTCGC GCCAGCCAAT ATGCTGCATC TGTATGACGC GATTGGTATC GCTCATTTTT CGATAGAGCA GCTCCCCTAC TCGATTATCA ACGCCACAAC CCCCAACACG GTCAGTAAAG CGGAGTTTTA TCAGGCCGCA CTCGACGCAG TAGCAAGCGA CCTGCCTCTG CCACCGCTGT GTGATAAAGA GGAGAAACGG ATTGTGTGCG ACAAATTATT GGCAGCTGGT TACCGTTTTC ATTTCTCTCA CACCTTAGAG GCTGTGCACG GTTATGAGTA A
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Protein sequence | MKRVVVIGAG WLGLPLAQWL KQQGHIVYAT RTTPQAVQTL EDQGIESFVC QLDQPDGLSD ALLERQCDTV IGCFPPGFRQ GAGEHYAKHW QNLVQHAKQA NIQKLVMISS TSVYPDIAKT MNEQDASLAL ALDNSAFDAK ARILLKAEQY VITSGMDYTI LRCSGLMGPK RHPSRFVSKM AQVSRLAPAN MLHLYDAIGI AHFSIEQLPY SIINATTPNT VSKAEFYQAA LDAVASDLPL PPLCDKEEKR IVCDKLLAAG YRFHFSHTLE AVHGYE
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