Gene VC0395_A1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1271 
Symbol 
ID5137163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp1350712 
End bp1351374 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content48% 
IMG OID640532729 
Productputative ABC transporter, ATP-binding protein 
Protein accessionYP_001217215 
Protein GI147674206 
COG category[R] General function prediction only 
COG ID[COG4136] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.481106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTTT CTCTCGAAAA CCTCGCCATC CATAAACAAG ATGGCCGCTG CCTTTTGGCA 
GAGTTTAATT TGACTATCGC AGAAGGCGAG ATTGTGAGCC TAATGGGCCC TAGTGGCTGC 
GGCAAATCCA CCTTATTGAG CGTGATTGCG GGTCATCTCG CCACGGATTT TACGTTTCAA 
GGTTCGATGA AACTTGGGGA TACGCAGCTC AACACCTTAC CGGCTCATCA ACGCCAAGTA 
GGCATGCTTT TTCAAGAAGA TTGGCTTTTT CCACACCTCA ATGTGTGGGA AAACTTAGCG 
TTTGCGTTGC CGAATTCGAT TAAAGGCGAA CAACGTAAGA AAAACGCTTA TGCCGCTTTA 
ACGAAAATTG CCCTCACTGA GCTGGCTTGC TCGTTTCCCG AGCAGATTTC CGGTGGCCAA 
CGGGCACGGA TCAGTTTGAT GCGTATGCTG CTCGCCGAGC CTAAATTGGT TCTGCTGGAT 
GAACCCTTCA GTAAATTAGA TAAAGCCTTA CGCAGCCAAT TTCGAGATTG GGTTTTCAAT 
CAGCTGACCA GCGCAGGGAT CCCAACACTT ATGGTCACTC ATGACCATGA GGATGTGCCA 
GTGGGCAGTC GTGTCATTGA ATGGCCCGTC ATTGAGCAAG AAACAGAGGT AAACCATGCT 
TGA
 
Protein sequence
MIFSLENLAI HKQDGRCLLA EFNLTIAEGE IVSLMGPSGC GKSTLLSVIA GHLATDFTFQ 
GSMKLGDTQL NTLPAHQRQV GMLFQEDWLF PHLNVWENLA FALPNSIKGE QRKKNAYAAL 
TKIALTELAC SFPEQISGGQ RARISLMRML LAEPKLVLLD EPFSKLDKAL RSQFRDWVFN 
QLTSAGIPTL MVTHDHEDVP VGSRVIEWPV IEQETEVNHA