| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1130 |
|---|
| Symbol | |
|---|
| ID | 5137157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 1192163 |
|---|
| End bp | 1192990 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640532588 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001217076 |
|---|
| Protein GI | 147674726 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2998] ABC-type tungstate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCA CAATGAAAAA AACAACCTTT ACCCTCGCAG CCGCTTCGTT AATTTTGGTC
AGTTACTCGG CTTCTAGTGC CGATGACGCT CGTATTCGTC TTGCGACCAC CACCAGTACT
TACGATTCTG GCTTGCTTGA TTACCTCCTG CCAAAATTTG AGCAAGATAC GGGTTATAAA
GTGGATGTGA TCGCCACTGG CACAGGTAAA GCGCTGAAAA TGGGCGAAAA TGGCGATGTG
GATTTGGTGA TGACCCATGC ACCGAAAGCC GAAGCCAGCT TTGTTGAGGC AGGTTTCGGT
GTTCTACCAC GTAAACTGAT GTACAACGAC TTTGTGGTGG TTGGCCCAGA AAGTGATCCG
GCTAAAATCG CCGATGAAAA GAACATCGCG AAAGTATTTG AAAATATTGC TAAAAGCGGC
GCTGTATTTA TCTCACGTGG TGATGATTCC GGCACACACA AGAAAGAGCT CGGCATTTGG
GCACAAAACA AGATTGAACC GAATTTCGGT GGCTACCGTT CTATTGGTCA AGGCATGGGT
CCAACACTGA ATATGGCGTC AGAAATGCAG GCTTATACCC TGACCGACCG AGGGACTTGG
CTGGCTTACA ACAATAAGTT GGCTCTCAAG ATTCTGTTTG AAGGTGATGA GCAACTGTTT
AACCCTTACC AAGTGATCAT TGTCAACCCT GAGCGTTACC CAACCACCCA ATATCATGCC
GCTAAAGTGT TTAGTGATTG GCTGGTGAAC CCTAAAGGCC AGCAGTTGAT TAACGAGTTT
AAAGTCAATG GCCAACAACT CTTTGTGGCC AATGCGGACA AGCAGTAA
|
|---|
| Protein sequence | MEFTMKKTTF TLAAASLILV SYSASSADDA RIRLATTTST YDSGLLDYLL PKFEQDTGYK
VDVIATGTGK ALKMGENGDV DLVMTHAPKA EASFVEAGFG VLPRKLMYND FVVVGPESDP
AKIADEKNIA KVFENIAKSG AVFISRGDDS GTHKKELGIW AQNKIEPNFG GYRSIGQGMG
PTLNMASEMQ AYTLTDRGTW LAYNNKLALK ILFEGDEQLF NPYQVIIVNP ERYPTTQYHA
AKVFSDWLVN PKGQQLINEF KVNGQQLFVA NADKQ
|
|---|
| |