| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0956 |
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| Symbol | prpE |
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| ID | 5135972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 984309 |
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| End bp | 986207 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640532414 |
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| Product | propionate--CoA ligase |
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| Protein accession | YP_001216902 |
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| Protein GI | 147675302 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAGCAA GGAGTAATGC GATGTCTGCC TATCAAGAGC AATATCAATG GGCGAAAGAG
CAGCCCGAAG CCTTCTGGCG CAAACAAGCG CAGCAGATCG ACTGGTTTCA ACCGCCGCAA
ACCATTTTGG CCAATGACGA ACATGGTATC GAACGTTGGT TTCCCGATGG TGTACTCAAT
ACCTGTTGGT TAGCACTCGA CTATCATTGT GAACAAGGAC GTGGTGATCA CACGGCGCTG
ATTTATGATT CGCCCGTGAC AGGCAAAAAG CAGCGCTACA GTTACTCGGC ACTGCGTGAC
AGTGTCGCGA AAATTGCTGG TATGCTGGCC GCACAGGGGG TGAGCAAGGG TGATCGCGTG
ATCATCTACA TGCCGATGAT CCCAGAAGCG GCGATGGCGA TGCTGGCTTG TGCGCGTTTG
GGCGCGATTC ACTCGGTGGT GTTTGGTGGC TTTGCACCGA ATGAGCTGGC AGTTCGGATT
GAAGATGCGG AGCCGAAAGT GATCATGACC GCCTCGTGCG GCGTGGAAAT CAATAAGGTG
ATTCCCTACA AGCCCATGGT CGATAAAGCC ATTATGGATA GCCGCTGGAA ACCTGAAAAA
GTCTTGGTTT ATCAGCGCAG TGAATGCCGC GCCGAGCTCA CTCATGCCCG CGATTTGGAA
TGGAACACGG TCGTGCAATC GGCCACGCCA CACGGTTGTG TGCCTGTGCT CGCCACCGAT
CCGCTGTATA TCCTTTACAC CTCAGGCACC ACAGGCAAAC CGAAAGGCGT GGTGCGCGAT
AATGGCGGCC ACGCGGTTGC GCTCAAGTAT TCAATGCAGA TTATCTACAA CATGCCGCAA
GACGGGGTGT TTTGGGCAGC TTCGGATGTG GGCTGGGTAG TCGGTCACTC CTATATTGTG
TATGCGCCGC TCATTCACGG TTGCACCACC ATTTTGTATG AAGGCAAACC GGTACGCACA
CCCGATCCCG GCGCGTTTTG GCGAGTGTGT CAGGAGTACC AAGTCACCGC ACTGTTTTCT
GCGCCGACCG CGTTTCGTGC CATCAAAAAA GAAGATCCAA ATGGCGATTA TTTAAAACAG
TACGATTTGT CGGCGTTAAC CACCATTTTT ATGGCCGGAG AGCGGCTTGA CCCGCCGACC
TTGGAATGGG TACAAAGCAA AACAGGCAAG CCAGTGATTG ATCACTGGTG GCAAACCGAA
ACGGGTTGGG CGATTGCTGG AAACCCAACG GGTCTTGAAT CTATGCCCAT CAAAGCGGGC
TCGGCAACCA AACCCATCCC CGGTTATCAG GTGGAGATTC TTAATGAGCT TGGCGAAAAC
ATGCCCGCCA ATCAGCAAGG TTTTGTCGCA CTAAAAAGGC CTCTACCACC AAGCTGTTTG
CCAACCGTTT GGCGTAACCA TGACCGTTTT GAGTCGGGCT ATTTGGCGCA ATTCCCCGGT
TATTATGTAT CCGGTGATGG CGGTTATCTC GATGAAGACG GGTATCTGTT CATCATGGGA
CGCATCGATG ATGTGATCAA CGTTGCGGGG CATCGATTAT CGACAGGCGA GATGGAAGAG
ATTGTCGGCG CGCATCCGGC TGTCGCGGAA TGTGCGGTGA TTGGCGTCCA CGACGAGCTG
AAAGGGCAGT TGCCACTGGG TTTAGTGGTG CTCAAAGATG GGGTGAAGAT TGATGCGCAA
ACGCTGGAGC AAGAGTTGGT TGCCAGTGTG CGCAATCAAA TTGGTGCGGT GGCTTGCTTT
AAGCATGCCA TAGTGGTCGA ACGCTTACCG AAAACGCGAT CCGGCAAAAT TTTGCGGCGT
ATCATCCGCC AAATCGCTGA TGGTGAGAGT TACACCATTC CATCTACGAT TGACGATCCC
ATGAGCCTCA ATGAGCTGGA AAACCTGTTT CAGCACTGA
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| Protein sequence | MRARSNAMSA YQEQYQWAKE QPEAFWRKQA QQIDWFQPPQ TILANDEHGI ERWFPDGVLN
TCWLALDYHC EQGRGDHTAL IYDSPVTGKK QRYSYSALRD SVAKIAGMLA AQGVSKGDRV
IIYMPMIPEA AMAMLACARL GAIHSVVFGG FAPNELAVRI EDAEPKVIMT ASCGVEINKV
IPYKPMVDKA IMDSRWKPEK VLVYQRSECR AELTHARDLE WNTVVQSATP HGCVPVLATD
PLYILYTSGT TGKPKGVVRD NGGHAVALKY SMQIIYNMPQ DGVFWAASDV GWVVGHSYIV
YAPLIHGCTT ILYEGKPVRT PDPGAFWRVC QEYQVTALFS APTAFRAIKK EDPNGDYLKQ
YDLSALTTIF MAGERLDPPT LEWVQSKTGK PVIDHWWQTE TGWAIAGNPT GLESMPIKAG
SATKPIPGYQ VEILNELGEN MPANQQGFVA LKRPLPPSCL PTVWRNHDRF ESGYLAQFPG
YYVSGDGGYL DEDGYLFIMG RIDDVINVAG HRLSTGEMEE IVGAHPAVAE CAVIGVHDEL
KGQLPLGLVV LKDGVKIDAQ TLEQELVASV RNQIGAVACF KHAIVVERLP KTRSGKILRR
IIRQIADGES YTIPSTIDDP MSLNELENLF QH
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