| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0885 |
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| Symbol | |
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| ID | 5135507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 899187 |
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| End bp | 900194 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640532343 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001216831 |
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| Protein GI | 147675735 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3489] Predicted periplasmic lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.584322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CAGTGACTCT GCTAGCGGTG TCTTTACTGG CTGCGTGTCA GAGTGCTCCA
GACATGGAGC ATCCTAGTCA AGCGGTATTC GAGCTAGAGC GTGAATCTGC CCACCTTCTC
GCTGAGCAAA CCAAGCAGTT ACAGCAGCGT ATGGCTCACT ATTGCCAAGC GCCGACGACG
GATATATCAG CACTGAAACA AGAGTGGCAA GCCAGCATGC AAGGTTGGAT GGCCTTACAA
GGACAGCAGC GTGGGCCGAG TGCCGCATTA GATTTGAGCT GGAATATGCA ATTCTGGCCA
GATAAAAAAG ACACGACTGG GCATAAAATG AAGCAGCTGC TCGCCAAACC GCCAGTATGG
GAAGTCGACG ATATTGCAAA ACAGAGTGTG GCAGTGCAAG GGTTGGGGGC ATTGGAATGG
CTCATTTTCG ATAGCGCATC GCCTTTGCTG ACTGCACCGC AGCAAGCTTG TCCAGCCGCG
ATGGCTATCA GTGCGACTGT GCAGCGTAAT GCCACTCACA TTGCTAAGGC TTGGCAAGAG
AACCCATGGC AATCTTTGGA TGATCGCACT TGGCGTGCGG AGTACATCGC GCTGCTTTCC
AATCAGTTGG AGTTTACGCT CTCTAAGCTC AATCGGCCGC TGGCCAACAT TGGTCAGCCA
CGGCCTTATT TCTCGGAGTC GTGGCGCTCG AAAACCTCGC TGAGCAATAT GCGTTATAAC
TTGTTGGCGA TTCAAGCCTT ATACCTTGCC GATGGCAAAG GTATGGATGC GATGCTGCGC
CAACAAGGTA TGGTTGCCAC GGCGGATCGC GTCACCACGC AGTTGGCCGG GATTATCGAA
ACTTGGCCGC AACAAGCAAG CCTGTTTGAT TTGCTGCAAA CCAAAGCGGG GTATCGCGAG
GGTTTAGTTT TGCGCGACAA GCTCGAGCAA CTGAACTATT TGCTGCACGA CGAAGTGGCT
GTGGGACTCG GTGTGGTCAT AGGGTTTAAT GCAACCGATG GTGACTGA
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| Protein sequence | MKKTVTLLAV SLLAACQSAP DMEHPSQAVF ELERESAHLL AEQTKQLQQR MAHYCQAPTT
DISALKQEWQ ASMQGWMALQ GQQRGPSAAL DLSWNMQFWP DKKDTTGHKM KQLLAKPPVW
EVDDIAKQSV AVQGLGALEW LIFDSASPLL TAPQQACPAA MAISATVQRN ATHIAKAWQE
NPWQSLDDRT WRAEYIALLS NQLEFTLSKL NRPLANIGQP RPYFSESWRS KTSLSNMRYN
LLAIQALYLA DGKGMDAMLR QQGMVATADR VTTQLAGIIE TWPQQASLFD LLQTKAGYRE
GLVLRDKLEQ LNYLLHDEVA VGLGVVIGFN ATDGD
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