| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0875 |
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| Symbol | nrdA |
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| ID | 5135322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 884854 |
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| End bp | 887139 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532333 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001216821 |
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| Protein GI | 147674951 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0454664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAC AACTTACTGT CACCAAGCGT GATGGCCGCA AAGAAAACAT TGATCTGGAT
AAGATCCACC GAGTGATCAC TTGGGCTGCC GAAGGTCTGC AAAACGTATC TGTCTCACAA
GTAGAACTGC GCGCTCACAT TCAGTTCTAT GACGGCATTA CGACTTCAGA CATTCATGAA
ACCATCATTA AGTCAGCAGC GGATCTGATC TCAGAAGAGA CCCCCGACTA CCAATACCTT
GCTGCGCGTC TTGCGGTTTT CCACCTGCGC AAAAAGGCCT ACGGTCAATA CGAGCCACCT
ACACTGCTCG CTCATGTCAC CAAGATGGTT GAGAAAGGCA AATACGACAA GCATTTGCTC
GAAGACTATA CCCGTGAAGA GCTGGAGCTG ATGGATCAGT TCATTGATCA CCGTCGTGAC
CTTGATTTCT CTTACGCTGC AGTGAAACAG CTTGAAGGCA AATATTTCGT ACAAAACCGT
GTTACCGGCC AAATCTACGA AAGTGCACAG TTCCTCTATA TTCTGGTTGC GGCTTGCCTG
TTTGCGAAGT ATCCCAAAGA GACGCGCCTT GATTACATCA AGCGTTTCTA CGATGCGACG
TCGACCTTTA AGATCTCGCT ACCTACACCG ATTATGTCGG GTGTACGTAC TCCTACTCGT
CAGTTCAGCT CTTGTGTACT GATTGAATGT GGTGACAGCC TTGATTCTAT CAATGCAACG
GCAAGCTCGA TTGTTCGCTA CGTTTCTCAA CGTGCCGGTA TTGGTATCAA CGCAGGCCGC
ATTCGTGCGC TGGGTTCGGA AATCCGTGGT GGTGAAGCGT TCCACACTGG CTGTATCCCC
TTCTACAAAT ACTTCCAAAC CGCAGTGAAA TGCTGCTCGC AAGGTGGTGT TCGTGGTGGT
GCAGCAACCG TATTCTACCC TCTGTGGCAT GGTGAAGCGG AATCTCTGCT GGTTCTGAAG
AACAACCGTG GTGTAGAAGA GAACCGTGTT CGTCATATGG ATTACGGTGT TCAGCTCAAC
AAACTGATGT ACAAGCGTCT GGTTGAAGGT GGCAACATTA CCCTGTTCTC TCCTTCTGAT
GTGCCGGGAC TGTACGACGC TTTCTTCCAA GATCAGGATG AGTTCGAACG CCTGTACGTG
AAGTACGAAA ACGATCCTTC AATTAAGAAG AAAACCGTTA AAGCGCTGGA AATCTTTACT
CTGCTGATGC AAGAGCGTGC TTCAACAGGC CGTATCTACA TCCAAAACGT TGACCACTGT
AACACGCACA GCCCATTTGA TGCGGCGGTT GCACCTGTGC GTCAATCAAA CCTGTGTCTG
GAAATCGCGC TACCGACTTC GCCACTGGCG AATGTGGAAG ATGAAAGCGG TGAAATTGCT
CTGTGTACCC TCTCTGCGTT TAACTTAGGC GCGATTGAGT CACTGGATGA TTTTGAAGAG
CTGTCTGACC TTGTGGTTCG TGCTCTAGAT GCATTATTGG ATTACCAAGA CTACCCACTG
CCTGCGGCAC GTCGTTCTTC AATGAACCGC CGTACTCTGG GTGTGGGTGT GATCAACTAC
GCTTACTACC TAGCGAAAAA CGGTGTGAAA TACTCTGACG GCAGCGCAAA TGGCCTGACG
CACCGCACGT TTGAAGCCAT GCAGTATCAC TTGCTGCGCG CTTCTATGAA GCTGGCGAAA
GAACAAGGTC GTTGCCCACT GTTCCATGAG ACCAACTACG CGAAAGGCTT GATGCCAATC
GATACTTATA AGAAAGATAT CGATCTGGTG TGTGCAGAGC CTCTGCATTA CGACTGGGAT
AAGCTGCGTC ACGAGATCAT GGAACACGGT CTGCGTAACT CTACGCTGAC GGCACTGATG
CCTTCTGAGA CTTCATCGCA AATCTCTAAC GCGACCAACG GTATTGAGCC ACCACGTGGT
TACGTCTCGG TCAAAGCCTC AAAAGACGGT ATCTTGAAAC AAGTGGTTCC AGAATTCACT
CGCTTAAAAG AGAACTATGA ACTGCTGTGG AACATCGGCT CAAACGATGG CTATCTGCAC
TTAGTGGGTA TCATGCAAAA GTTCGTTGAC CAAGCGATCT CTGCCAATAC TAACTACGAT
CCAAGCAATT TCGATTCTGG CAAAGTACCG ATGAAAAAAC TGCTCCAAGA TCTGCTGACA
GCGTATAAGT TTGGTGTGAA AACCTTGTAC TACCATAACA CTCGTGATGG CGCGAAAGAC
GAGCAGACCG ATGCTACGGT GAAAGTGCAG GAAGACGATT GTGCCAGCGG CGCTTGTAAG
ATCTAA
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| Protein sequence | MNQQLTVTKR DGRKENIDLD KIHRVITWAA EGLQNVSVSQ VELRAHIQFY DGITTSDIHE
TIIKSAADLI SEETPDYQYL AARLAVFHLR KKAYGQYEPP TLLAHVTKMV EKGKYDKHLL
EDYTREELEL MDQFIDHRRD LDFSYAAVKQ LEGKYFVQNR VTGQIYESAQ FLYILVAACL
FAKYPKETRL DYIKRFYDAT STFKISLPTP IMSGVRTPTR QFSSCVLIEC GDSLDSINAT
ASSIVRYVSQ RAGIGINAGR IRALGSEIRG GEAFHTGCIP FYKYFQTAVK CCSQGGVRGG
AATVFYPLWH GEAESLLVLK NNRGVEENRV RHMDYGVQLN KLMYKRLVEG GNITLFSPSD
VPGLYDAFFQ DQDEFERLYV KYENDPSIKK KTVKALEIFT LLMQERASTG RIYIQNVDHC
NTHSPFDAAV APVRQSNLCL EIALPTSPLA NVEDESGEIA LCTLSAFNLG AIESLDDFEE
LSDLVVRALD ALLDYQDYPL PAARRSSMNR RTLGVGVINY AYYLAKNGVK YSDGSANGLT
HRTFEAMQYH LLRASMKLAK EQGRCPLFHE TNYAKGLMPI DTYKKDIDLV CAEPLHYDWD
KLRHEIMEHG LRNSTLTALM PSETSSQISN ATNGIEPPRG YVSVKASKDG ILKQVVPEFT
RLKENYELLW NIGSNDGYLH LVGIMQKFVD QAISANTNYD PSNFDSGKVP MKKLLQDLLT
AYKFGVKTLY YHNTRDGAKD EQTDATVKVQ EDDCASGACK I
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