| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0852 |
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| Symbol | cdd |
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| ID | 5137396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 863531 |
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| End bp | 864418 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532310 |
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| Product | cytidine deaminase |
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| Protein accession | YP_001216798 |
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| Protein GI | 147675337 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01355] cytidine deaminase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.344916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAACC GTATTGAACA AGCATTACAA CAAATGCCTG CTTCTTTTGC CCCATATTTA
CGTGAATTGG TGTTGGCCAA GGATTTCGAT GCCACTTTCT CTGCCGAGCA GTATCAGCAG
CTTTTGACCC TTTCGGGTAT GGAAGATTCC GATTTGCGCG TCGCGCTGTT ACCTATCGCT
GCCGCTTACT CGTATGCCCC CATCTCTGAA TTTTATGTCG GTGCGATTGT ACGTGGCATC
TCCGGCCGCC TCTATCTGGG CGCCAATATG GAATTTACTG GTGCGCAGCT TGGACAAACC
GTACATGCTG AGCAATGCGC CATTAGCCAT GCTTGGATGA AAGGGGAAAA AGGGGTGGCA
GACATCACCA TCAACTTTAG CCCTTGCGGC CATTGCCGCC AGTTTATGAA TGAGCTGACC
ACAGCGTCTT CGCTGAAAAT TCAACTGCCC AAGCGTGCTG CCAAAACTTT GCAAGAGTAC
CTCCCTGAGT CGTTTGGCCC TGCCGATCTC GGCATTGATT CTGGCCTGAT GAGCCCAGTC
AATCATGGTA AAACCAGTGA CGATGATGAA GAGCTGATCC AGCAAGCTCT GCGCGCGATG
AACATCAGCC ACTCGCCTTA TACCCAAAAC TTCAGTGGTG TGGCACTGAA AATGCGCAGT
GGCGCGATTT ACCTTGGCGC GTATGCCGAA AATGCTGCGT TTAACCCAAG TTTGCCACCG
CTACAAGTTG CCTTAGCACA AGCGATGATG ATGGGTGAAT CATTCGAGGA TATTGAAGCC
GCAGCTCTGG TAGAGAGTGC AACCGGCAAA ATCAGCCATC TTGCCGATAC TCAAGCAACG
CTGGAAGTGA TCAATCCCGA TATTCCACTT TCTTATCTCT CACTGTAA
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| Protein sequence | MRNRIEQALQ QMPASFAPYL RELVLAKDFD ATFSAEQYQQ LLTLSGMEDS DLRVALLPIA
AAYSYAPISE FYVGAIVRGI SGRLYLGANM EFTGAQLGQT VHAEQCAISH AWMKGEKGVA
DITINFSPCG HCRQFMNELT TASSLKIQLP KRAAKTLQEY LPESFGPADL GIDSGLMSPV
NHGKTSDDDE ELIQQALRAM NISHSPYTQN FSGVALKMRS GAIYLGAYAE NAAFNPSLPP
LQVALAQAMM MGESFEDIEA AALVESATGK ISHLADTQAT LEVINPDIPL SYLSL
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