| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0792 |
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| Symbol | trpB |
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| ID | 5135558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 801524 |
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| End bp | 802714 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532250 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001216742 |
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| Protein GI | 147675541 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00347207 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAT TAAACGCCTA TTTTGGCGAA TTCGGTGGGC AGTTTGTGCC ACAAATTTTG
GTTCCGGCAC TCGATCAACT GGAACAAGCT TTTATTGATG CCCAGCAGGA TGATGCTTTT
CGCGCTGAAT TTATGAGCCT ACTGCAAGAG TACGCGGGTC GCCCCACTGC GCTGACACTC
ACGCAAAACA TCACCAAAGG CACCAAAACC AAACTCTATT TGAAGCGTGA AGATCTACTG
CACGGCGGCG CGCACAAAAC CAACCAAGTT TTGGGCCAAG CCCTGCTCGC CAAACGTATG
GGCAAACATG AAATTATCGC CGAGACAGGC GCAGGTCAAC ACGGTGTCGC AACCGCATTA
GCCTGTGCAC TGCTTGGCCT AAAATGCCGC GTGTACATGG GTGCAAAAGA CGTTGAGCGC
CAAAGCCCAA ACGTGTTCCG TATGCGCTTA ATGGGTGCCA CCGTGATCCC TGTTCATTCA
GGTTCAGCAA CGCTAAAAGA TGCCTGTAAC GAAGCGCTGC GTGACTGGTC AGCCAGCTAT
GAAACTGCGC ATTATCTGCT CGGTACTGCG GCAGGCCCTC ACCCATTCCC AACCATAGTG
CGTGAATTCC AACGCATTAT TGGTGAAGAA ACCAAAAACC AAATCCTTGC TCGTGAAGGT
CGTTTGCCCG ATGCGGTGAT CGCTTGTGTC GGTGGCGGCT CAAACGCGAT TGGTATGTTT
GCCGATTTCA TCGAAGAAGA ATCCGTACGT TTGATCGGTA TTGAGCCAGC AGGTAAAGGC
ATTCATACCC ATCAACATGG TGCACCACTC AAACACGGTA AAACTGGTAT CTTCTTCGGC
ATGAAAGCAC CGTTGATGCA AGATGAACAT GGTCAAGTGG AAGAGTCTTA CTCTGTCTCT
GCGGGGCTGG ATTTCCCATC GGTGGGTCCA CAACATGCTT ACCTCAACGC CATTGGTCGT
GCGGAATATG AAAGCATTAC CGATGATGAA GCACTCGATG CGTTCCAAGC GTTGGCACGT
AACGAAGGCA TCATTCCAGC GCTGGAGTCT TCACACGCTC TCGCGCATGC AATCAAAATG
GCGTATGCCG AACCAGACAA AGAGCAGTTG CTCGTGGTTA ACCTTTCGGG CCGAGGTGAT
AAGGATATTT TCACCGTACA CAAATTACTT GAAGACAAAG GAGCGTTGTA A
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| Protein sequence | MAKLNAYFGE FGGQFVPQIL VPALDQLEQA FIDAQQDDAF RAEFMSLLQE YAGRPTALTL
TQNITKGTKT KLYLKREDLL HGGAHKTNQV LGQALLAKRM GKHEIIAETG AGQHGVATAL
ACALLGLKCR VYMGAKDVER QSPNVFRMRL MGATVIPVHS GSATLKDACN EALRDWSASY
ETAHYLLGTA AGPHPFPTIV REFQRIIGEE TKNQILAREG RLPDAVIACV GGGSNAIGMF
ADFIEEESVR LIGIEPAGKG IHTHQHGAPL KHGKTGIFFG MKAPLMQDEH GQVEESYSVS
AGLDFPSVGP QHAYLNAIGR AEYESITDDE ALDAFQALAR NEGIIPALES SHALAHAIKM
AYAEPDKEQL LVVNLSGRGD KDIFTVHKLL EDKGAL
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