| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0791 |
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| Symbol | trpA |
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| ID | 5135310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 800718 |
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| End bp | 801524 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640532249 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001216741 |
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| Protein GI | 147673648 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0000662896 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGTT ATCAAGCCCT ATTTCAACGC CTGAGCGCCG CTCAGCAAGG CGCTTTCGTT
CCTTTCGTGA CCATTGGTGA CCCAAACCCC GAGCAGTCAC TCGCCATCAT GCAAACCCTG
ATTGATGCAG GAGCGGATGC GCTTGAGCTT GGCATGCCGT TTTCAGATCC TCTGGCCGAT
GGTCCGACGA TTCAAGGCGC GAACTTACGT GCATTAGCGG CGAAAACCAC GCCAGATATC
TGTTTTGAGC TGATCGCGCA GATCCGTGCG CGTAACCCTG AGACTCCGAT TGGCTTACTG
ATGTATGCCA ACTTGGTTTA CGCACGCGGC ATCGACGATT TTTATCAACG CTGCCAAAAA
GCTGGCGTGG ATTCGGTACT GATTGCCGAT GTACCCACCA ACGAAAGCCA GCCTTTTGTG
GCGGCCGCAG AGAAATTTGG CATTCAACCA ATCTTTATTG CGCCACCAAC GGCCAGTGAT
GAAACCTTAC GAGCAGTTGC TCAACTCGGT AAAGGCTACA CTTATTTGCT TTCGCGCGCT
GGGGTGACTG GGGCTGAAAC CAAAGCCAAC ATGCCTGTGC ATGCCCTGCT TGAACGTCTG
CAACAATTTG ATGCGCCACC AGCACTGCTA GGTTTTGGTA TTTCAGAGCC CGCTCAAGTT
AAACAAGCGA TTGAAGCTGG CGCAGCGGGA GCCATTTCCG GATCGGCGGT GGTAAAAATC
ATCGAAACGC ATTTGGATAA TCCAGCTAAG CAGCTGACTG AGCTGGCAAA CTTCACTCAA
GCCATGAAAA AAGCAACAAA AATTTAA
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| Protein sequence | MNRYQALFQR LSAAQQGAFV PFVTIGDPNP EQSLAIMQTL IDAGADALEL GMPFSDPLAD
GPTIQGANLR ALAAKTTPDI CFELIAQIRA RNPETPIGLL MYANLVYARG IDDFYQRCQK
AGVDSVLIAD VPTNESQPFV AAAEKFGIQP IFIAPPTASD ETLRAVAQLG KGYTYLLSRA
GVTGAETKAN MPVHALLERL QQFDAPPALL GFGISEPAQV KQAIEAGAAG AISGSAVVKI
IETHLDNPAK QLTELANFTQ AMKKATKI
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