Gene VC0395_A0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0790 
Symbol 
ID5135295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp799830 
End bp800402 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content48% 
IMG OID640532248 
Productproton/glutamate symporter 
Protein accessionYP_001216740 
Protein GI147674225 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00000536716 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTGT TAAAGACAAA GGGTTTACTA AACAACATCG GCGTGCAAGT GGTGATCGCC 
ATGCTCGCGG GTACCGCAGT CGGTGCAGCA ATGGGTCACG ATGCGACACT ATTTGCTCCA 
CTGGGTGCGA TTTTTATTAA TCTGATCAAA ATGCTGGTGA TTCCTCTGGT GGCTGTGGCA 
CTGATTTCTG ATGCAGCAGG TCTGGGTGAT AGCCATTCTG CTGGCAAGGT CGGTGCAGTG 
ACGTTAAGTT ACTTTGCTAT TACCTCTGCC GCCGCCGTAG CTCTGGCATT GATCATGGGT 
GAACTGTTCC AACCGGGTGT CGGAGTCGAT GTTTCTGGTG TAGAGAGCAT GTTCTCTTCT 
GAATACGCTG CGCAAGGTGA GCTCCCCACT TTCTGGGCAA CCATCATTGG TATGATCCCA 
ACCAACGTTT TCCAGTCACT GAACGAAGCG AACATTCTAC AGATCTTGGT TTTCTGTCTG 
TTTTTAGGCA TTGCGATTTC TAAGCAAGCC AAAGAAAAAC GTGACCCAGT GATCAACGCG 
GTGAACACCA TTGATAAGAG ACTAGAAAAA TGA
 
Protein sequence
MEVLKTKGLL NNIGVQVVIA MLAGTAVGAA MGHDATLFAP LGAIFINLIK MLVIPLVAVA 
LISDAAGLGD SHSAGKVGAV TLSYFAITSA AAVALALIMG ELFQPGVGVD VSGVESMFSS 
EYAAQGELPT FWATIIGMIP TNVFQSLNEA NILQILVFCL FLGIAISKQA KEKRDPVINA 
VNTIDKRLEK