Gene VC0395_A0743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0743 
Symbol 
ID5136036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp769934 
End bp770548 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content48% 
IMG OID640532201 
Productbacteriophage Mu Gp45 protein 
Protein accessionYP_001216693 
Protein GI147673123 
COG category[S] Function unknown 
COG ID[COG4384] Mu-like prophage protein gp45 
TIGRFAM ID[TIGR01644] phage baseplate assembly protein V 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGAGT TGGCTAAACG TTATATAGAT AAGATGATGA TGCCGCTTCG CCGCCGCATT 
TATTCTATGG TAGGCCGTGC CCTAGTAACG GGAATTGTTG AGGGTTTACA GCGCCAAAAC 
CTACAGCTTC AAATCGAGAA TGACGAAGCG GTGGATGATA TCGAGCGCTT CCAAAACTAC 
GGCATGACCT CCTATCCACC CGTGGGCAGT GAAGCTGTGG TAATAGCGCT CAAAGGTAGC 
CTAGACCAAC GAGTGGCCGT GGCGGTAGAG AAAAAAGATT TGAGACCAAA AGGTGAGCAA 
AACGATGTGA TCGTGTATCA TGCCGAAGGT CATCAAATCC GTCTTACCTC TAGCGGCCAA 
ATCATCGTCA CAGCAACTGA CGTTATTTTT GAAGCGGCTA ACTCCTTCAC TATTATCTCC 
CCAGAAACTT TGATTCAAGG CCCTTTGCAT GTGACAGGTG GAATTTCTAC CGACCTTGGG 
ATTTTTGCGA CTGGTGGCAT TACTTCTTCC AGCGTTGTTA GCGGTTCAGA TTTAACCGCA 
GGCAACATCA GCTATCTAGG TCATAAACAC AGAGACGCAG AGAACAGGCT TACAGGTACA 
CCAACACTAG GATAG
 
Protein sequence
MNELAKRYID KMMMPLRRRI YSMVGRALVT GIVEGLQRQN LQLQIENDEA VDDIERFQNY 
GMTSYPPVGS EAVVIALKGS LDQRVAVAVE KKDLRPKGEQ NDVIVYHAEG HQIRLTSSGQ 
IIVTATDVIF EAANSFTIIS PETLIQGPLH VTGGISTDLG IFATGGITSS SVVSGSDLTA 
GNISYLGHKH RDAENRLTGT PTLG